It would appear that defining ROOT in a Makefile interferes with portage. Reproducible: Always Steps to Reproduce: 1. emerge cbflib 2. ldd $(portageq envvar EPREFIX)/usr/lib/libcbf.so | grep libhdf5 Actual Results: libhdf5.so.7 => not found Expected Results: libhdf5.so.7 => /net/marbles/raid1/hattne/gentoo/usr/lib/libhdf5.so.7 (0x00002aaaaafc0000) !!! Your current profile is deprecated and not supported anymore. !!! Use eselect profile to update your profile. !!! Please upgrade to the following profile if possible: default/linux/amd64/13.0/no-multilib You may use the following command to upgrade: eselect profile set default/linux/amd64/13.0/no-multilib Portage 2.2.01.21890-prefix (prefix/linux/amd64, gcc-4.7.2, unavailable, 2.6.23.15-137.fc8 x86_64) ================================================================= System uname: Linux-2.6.23.15-137.fc8-x86_64-Intel-R-_Xeon-R-_CPU_X7350_@_2.93GHz-with-fedora-8-Werewolf KiB Mem: 33022968 total, 11418632 free KiB Swap: 32767992 total, 30465448 free Timestamp of tree: Tue, 23 Apr 2013 18:05:54 +0000 ld GNU ld (GNU Binutils) 2.23 ccache version 2.4 [disabled] app-shells/bash: 4.2_p39-r1 dev-java/java-config: 2.1.11-r3 dev-lang/python: 2.7.3-r3, 3.3.0-r1 dev-util/cmake: 2.8.10.2-r2 dev-util/pkgconfig: 0.28 sys-devel/autoconf: 2.69 sys-devel/automake: 1.12.4 sys-devel/binutils: 2.23 sys-devel/gcc: 4.7.2-r1 sys-devel/gcc-config: 1.8-r00.1 sys-devel/libtool: 2.4.2 sys-devel/make: 3.82-r4 sys-kernel/linux-headers: 3.8 Repositories: gentoo_prefix xtal-prefix ACCEPT_KEYWORDS="~amd64-linux" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5.5/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/revdep-rebuild /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -pipe" DISTDIR="/net/marbles/raid1/hattne/gentoo/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles force-prefix merge-sync news parallel-fetch preserve-libs protect-owned sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="en_GB.UTF-8" LDFLAGS="-Wl,-O1" MAKEOPTS="-j16" PKGDIR="/net/marbles/raid1/hattne/gentoo/usr/portage/packages" PORTAGE_CONFIGROOT="/net/marbles/raid1/hattne/gentoo/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/tmp/hattne" PORTDIR="/net/marbles/raid1/hattne/gentoo/usr/portage" PORTDIR_OVERLAY="/net/cci/hattne/gentoo/var/lib/layman/xtal-prefix" SYNC="rsync://rsync.prefix.freens.org/gentoo-portage-prefix" USE="amd64 berkdb bzip2 cli cracklib crypt cxx dri fortran gdbm iconv ipv6 mmx modules mudflap ncurses nls nptl openmp pcre prefix readline session sse sse2 ssl tcpd unicode zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en_GB en sv de da fr" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-3" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7 3.3" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Created attachment 346456 [details, diff] Change ROOT to CBF_ROOT in Makefile
Sorry, this bug needs revisiting
Cannot reproduce with recent prefix and linux-standalone profile. Closing as obsolete seems appropriate.
