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Bug 449288 - sci-libs/gsl-1.15: fails tests
Summary: sci-libs/gsl-1.15: fails tests
Status: RESOLVED OBSOLETE
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Related Packages
URL: https://tinderboxlogs.s3.amazonaws.co...
Whiteboard:
Keywords: TESTFAILURE
Depends on: 438768
Blocks:
  Show dependency tree
 
Reported: 2012-12-30 11:36 UTC by Diego Elio Pettenò (RETIRED)
Modified: 2021-05-25 19:08 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments

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Description Diego Elio Pettenò (RETIRED) gentoo-dev 2012-12-30 11:36:06 UTC
Portage 2.2.0_alpha142 (default/linux/amd64/10.0, gcc-4.7.2-asneeded, glibc-2.16.0, 3.4.7-hardened x86_64)
=================================================================
System uname: Linux-3.4.7-hardened-x86_64-AMD_Opteron-TM-_Processor_6272-with-gentoo-2.2
Timestamp of tree: Sat, 03 Nov 2012 05:00:01 +0000
ld GNU ld (GNU Binutils) 2.23
ccache version 3.1.8 [disabled]
app-shells/bash:          4.2_p39
dev-java/java-config:     2.1.12
dev-lang/python:          2.6.8, 2.7.3-r2, 3.2.3-r1
dev-util/ccache:          3.1.8
dev-util/cmake:           2.8.9-r1
dev-util/pkgconfig:       0.27.1
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.11.2
sys-apps/sandbox:         2.6
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.4_p6-r1, 1.9.6-r3, 1.10.3, 1.11.6, 1.12.4
sys-devel/binutils:       2.23
sys-devel/gcc:            4.6.3, 4.7.2
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.6 (virtual/os-headers)
sys-libs/glibc:           2.16.0
Repositories: gentoo tbamd64
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -ggdb -march=native -ftracer -frecord-gcc-switches"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /etc/entropy /opt/openjms/config /usr/share/bufrtables /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.0/conf /usr/share/openvpn/easy-rsa /usr/share/qpsmtpd/plugins /usr/share/themes/oxygen-gtk/gtk-2.0 /var/bind /var/lib/hsqldb /var/lib/redmine/config /var/spool/torque /var/yp/Makefile"
CONFIG_PROTECT_MASK="${EPREFIX}/etc/gconf /etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/games/angband/edit/ /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /var/lib/redmine/config/locales /var/lib/redmine/config/settings.yml"
CXXFLAGS="-O2 -pipe -ggdb -march=native -ftracer -frecord-gcc-switches"
DISTDIR="/var/cache/portage/distfiles"
FCFLAGS="-O2 -pipe -ggdb -march=native -frecord-gcc-switches"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fail-clean fixlafiles merge-sync news parallel-fetch protect-owned sandbox sfperms strict test test-fail-continue unknown-features-warn unmerge-orphans userfetch userpriv usersandbox"
FFLAGS="-O2 -pipe -ggdb -march=native -frecord-gcc-switches"
GENTOO_MIRRORS="http://ftp.ucsb.edu/pub/mirrors/linux/gentoo/ http://gentoo.mirrors.hoobly.com/ http://gentoo.llarian.net/"
LANG="en_US.utf8"
LC_ALL="C"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j24"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/tmp"
PORTDIR="/var/cache/tinderbox/tree"
PORTDIR_OVERLAY="/root/overlay"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="3dnow 3dnowex acl amd64 berkdb bzip2 cli cracklib crypt cups cxx dri emacs ffmpeg fortran gdbm gnutls gpm iconv icu intl ipv6 mmx modules mudflap multilib ncurses nls nptl openmp pam pax_kernel pcre pdf plasma pppd qt3support readline semantic-desktop session snmp sse sse2 sse3 sse4 ssl ssse3 tcmalloc tcpd udev unicode vhosts zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" PHP_TARGETS="php5-3" PYTHON_TARGETS="python3_2 python2_7" RUBY_TARGETS="ruby18 ruby19 ree18" USERLAND="GNU" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 1 Andreas Sturmlechner gentoo-dev 2013-05-18 15:28:44 UTC
All tests passed on my system, with the relevant section from your log:


make[2]: Leaving directory `/var/tmp/portage/sci-libs/gsl-1.15/work/gsl-1.15/histogram'
make[1]: Leaving directory `/var/tmp/portage/sci-libs/gsl-1.15/work/gsl-1.15/histogram'
Making check in ode-initval
make[1]: Entering directory `/var/tmp/portage/sci-libs/gsl-1.15/work/gsl-1.15/ode-initval'
make  test
make[2]: Entering directory `/var/tmp/portage/sci-libs/gsl-1.15/work/gsl-1.15/ode-initval'
x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I..    -O2 -march=core2 -pipe -floop-block -floop-interchange -floop-strip-mine -c test.c
/bin/sh ../libtool --tag=CC   --mode=link x86_64-pc-linux-gnu-gcc  -O2 -march=core2 -pipe -floop-block -floop-interchange -floop-strip-mine  -Wl,-O1 -Wl,--as-needed -o test test.o libgslodeiv.la ../linalg/libgsllinalg.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../matrix/libgslmatrix.la ../permutation/libgslpermutation.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la  ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la  -lm 
libtool: link: x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -floop-block -floop-interchange -floop-strip-mine -Wl,-O1 -o .libs/test test.o  -Wl,--as-needed ./.libs/libgslodeiv.a ../linalg/.libs/libgsllinalg.a ../blas/.libs/libgslblas.a ../cblas/.libs/libgslcblas.so ../matrix/.libs/libgslmatrix.a ../permutation/.libs/libgslpermutation.a ../vector/.libs/libgslvector.a ../block/.libs/libgslblock.a ../complex/.libs/libgslcomplex.a ../ieee-utils/.libs/libgslieeeutils.a ../err/.libs/libgslerr.a ../test/.libs/libgsltest.a ../sys/.libs/libgslsys.a ../utils/.libs/libutils.a -lm
make[2]: Leaving directory `/var/tmp/portage/sci-libs/gsl-1.15/work/gsl-1.15/ode-initval'
make  check-TESTS
make[2]: Entering directory `/var/tmp/portage/sci-libs/gsl-1.15/work/gsl-1.15/ode-initval'
Completed [3509/3509]
PASS: test




Portage 2.2.0_alpha175 (default/linux/amd64/13.0/desktop, gcc-4.7.3, glibc-2.16.0, 3.9.2-ownage x86_64)
=================================================================
System uname: Linux-3.9.2-ownage-x86_64-Intel-R-_Core-TM-2_Duo_CPU_L9400_@_1.86GHz-with-gentoo-2.2
KiB Mem:     3939400 total,   1836756 free
KiB Swap:    4194292 total,   3746300 free
Timestamp of tree: Sat, 18 May 2013 09:15:01 +0000
ld GNU ld (GNU Binutils) 2.22.90.20120727
app-shells/bash:          4.2_p45
dev-java/java-config:     2.1.12-r1
dev-lang/python:          2.7.3-r3, 3.2.3-r2
dev-util/cmake:           2.8.10.2-r2
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.9.6-r3, 1.11.6, 1.12.6
sys-devel/binutils:       2.22.90
sys-devel/gcc:            4.7.3
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.9 (virtual/os-headers)
sys-libs/glibc:           2.16.0
Repositories: gentoo qt kde bugfix ownage java-crap kde-copy
Installed sets: @development, @enlightenment, @fonts, @kde410-ownage, @kdepim410-ownage, @kdetools-ownage, @mailserver, @php-ownage, @qt-ownage, @system, @texlive12-ownage, @useful
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA PUEL googleearth Q3AEULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -march=core2 -pipe -floop-block -floop-interchange -floop-strip-mine"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/polkit-1/actions /usr/share/themes/oxygen-gtk/gtk-2.0"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.4/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -march=core2 -pipe -floop-block -floop-interchange -floop-strip-mine"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--keep-going"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirror.ynet.sk/pub/gentoo/ http://ftp.fi.muni.cz/pub/linux/gentoo/ ftp://mirror.ynet.sk/pub/gentoo/ http://gentoo.lagis.at/ ftp://tux.rainside.sk/gentoo/ http://gentoo.inode.at/ http://tux.rainside.sk/gentoo/ ftp://gentoo.lagis.at/ http://gentoo.mirror.dkm.cz/pub/gentoo/ ftp://ftp.fi.muni.cz/pub/linux/gentoo/ http://gentoo.inf.elte.hu/ ftp://gentoo.mirror.dkm.cz/pub/gentoo/ ftp://gentoo.inf.elte.hu/ http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/"
LANG="en_GB.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j2"
Comment 2 Nikoli 2014-11-23 09:58:33 UTC
For me tests work fine with gsl-1.16, but only with MAKEOPTS='-j1'