Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 259849 - new package request sci-biology/consed2gap: a pipeline to convert from consed to gap formatted genome assemblies
Summary: new package request sci-biology/consed2gap: a pipeline to convert from conse...
Status: RESOLVED OBSOLETE
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: High enhancement (vote)
Assignee: Default Assignee for New Packages
URL: http://genome.imb-jena.de/software/co...
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2009-02-21 20:42 UTC by Martin Mokrejš
Modified: 2019-04-10 22:15 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---

Attachments
Add an attachment (proposed patch, testcase, etc.)

Note You need to log in before you can comment on or make changes to this bug.
Comment 1 Andreas K. Hüttel archtester gentoo-dev 2010-10-30 11:54:29 UTC 
No comments have been made on this bug report for some time.
Is anyone still interested in integration of this package? 

If yes, please indicate that here in this bug report.

Otherwise we'll resolve the bug in the near future, since sci(-*) has
an extremely large number of pending package requests and we would like
to focus...
Comment 2 Andreas K. Hüttel archtester gentoo-dev 2010-12-16 16:04:15 UTC 
No response for six weeks. Resolving...
Comment 3 Martin Mokrejš 2011-01-08 13:19:39 UTC 
This partly overlaps with upcoming packages in science overlay:

caftools
align_to_scf

This package has some perl modules but on the original webpage it claims it has a special align_to_scf version. There are also some libs.

Will ask upstream for details will put it into overlay.