| Summary: | science: obsolete hashes used in Manifest | ||
|---|---|---|---|
| Product: | Gentoo Linux | Reporter: | Michał Górny <mgorny> |
| Component: | Overlays | Assignee: | Gentoo Science Related Packages <sci> |
| Status: | RESOLVED FIXED | ||
| Severity: | normal | CC: | andrewammerlaan |
| Priority: | Normal | ||
| Version: | unspecified | ||
| Hardware: | All | ||
| OS: | Linux | ||
| Whiteboard: | |||
| Package list: | Runtime testing required: | --- | |
| Bug Depends on: | |||
| Bug Blocks: | 902221 | ||
|
Description
Michał Górny
2023-03-20 06:22:22 UTC
Those packages are fetch-restricted. Only someone with access to the software can regenerate the manifest files. For this reason these packges have already been masked. Someone with access needs to step up and fix these ebuilds, otherwise they will have to be removed. Here's the list: dev-lang/pgi sci-biology/signalp sci-biology/tmhmm sci-chemistry/ligplot+ sci-chemistry/nmrview sci-chemistry/rosetta-tools The bug has been closed via the following commit(s): https://gitweb.gentoo.org/proj/sci.git/commit/?id=1f11cdaea2f9c040e9eef4e7552ffda13016eedb commit 1f11cdaea2f9c040e9eef4e7552ffda13016eedb Author: Andrew Ammerlaan <andrewammerlaan@gentoo.org> AuthorDate: 2023-04-25 11:27:47 +0000 Commit: Andrew Ammerlaan <andrewammerlaan@gentoo.org> CommitDate: 2023-04-25 11:27:59 +0000 sci-chemistry/rosetta-tools: treeclean Closes: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org> profiles/package.mask | 4 --- sci-chemistry/rosetta-tools/Manifest | 1 - sci-chemistry/rosetta-tools/metadata.xml | 11 -------- .../rosetta-tools/rosetta-tools-3.0.ebuild | 29 ---------------------- 4 files changed, 45 deletions(-) Additionally, it has been referenced in the following commit(s): https://gitweb.gentoo.org/proj/sci.git/commit/?id=1c236b098be9ef80615f681b063eb4247189e851 commit 1c236b098be9ef80615f681b063eb4247189e851 Author: Andrew Ammerlaan <andrewammerlaan@gentoo.org> AuthorDate: 2023-04-25 11:27:08 +0000 Commit: Andrew Ammerlaan <andrewammerlaan@gentoo.org> CommitDate: 2023-04-25 11:27:08 +0000 sci-chemistry/nmrview: treeclean Bug: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org> profiles/package.mask | 1 - sci-chemistry/nmrview/Manifest | 2 - sci-chemistry/nmrview/files/README.Gentoo | 17 -------- sci-chemistry/nmrview/files/nmrview.sh | 6 --- sci-chemistry/nmrview/files/nmrview.sh-r1 | 6 --- sci-chemistry/nmrview/metadata.xml | 12 ------ sci-chemistry/nmrview/nmrview-5.2.2-r3.ebuild | 57 --------------------------- 7 files changed, 101 deletions(-) https://gitweb.gentoo.org/proj/sci.git/commit/?id=99bb0d558f8f42fd8a39f3341213e379eabf7a79 commit 99bb0d558f8f42fd8a39f3341213e379eabf7a79 Author: Andrew Ammerlaan <andrewammerlaan@gentoo.org> AuthorDate: 2023-04-25 11:26:36 +0000 Commit: Andrew Ammerlaan <andrewammerlaan@gentoo.org> CommitDate: 2023-04-25 11:26:36 +0000 sci-chemistry/ligplot+: treeclean Bug: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org> profiles/package.mask | 1 - sci-chemistry/ligplot+/Manifest | 1 - sci-chemistry/ligplot+/ligplot+-1.4.ebuild | 42 ------------------------------ sci-chemistry/ligplot+/metadata.xml | 8 ------ 4 files changed, 52 deletions(-) https://gitweb.gentoo.org/proj/sci.git/commit/?id=0ceb993976976439639c7414d3e2aa2be5bb64de commit 0ceb993976976439639c7414d3e2aa2be5bb64de Author: Andrew Ammerlaan <andrewammerlaan@gentoo.org> AuthorDate: 2023-04-25 11:26:06 +0000 Commit: Andrew Ammerlaan <andrewammerlaan@gentoo.org> CommitDate: 2023-04-25 11:26:06 +0000 sci-biology/tmhmm: treeclean Bug: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org> profiles/package.mask | 1 - sci-biology/tmhmm/Manifest | 1 - sci-biology/tmhmm/metadata.xml | 8 -------- sci-biology/tmhmm/tmhmm-2.0c.ebuild | 39 ------------------------------------- 4 files changed, 49 deletions(-) https://gitweb.gentoo.org/proj/sci.git/commit/?id=df1b752e2d45731e3ed75840ec6b2e04e314bd64 commit df1b752e2d45731e3ed75840ec6b2e04e314bd64 Author: Andrew Ammerlaan <andrewammerlaan@gentoo.org> AuthorDate: 2023-04-25 11:25:25 +0000 Commit: Andrew Ammerlaan <andrewammerlaan@gentoo.org> CommitDate: 2023-04-25 11:25:25 +0000 sci-biology/signalp: treeclean Bug: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org> profiles/package.mask | 1 - sci-biology/signalp/Manifest | 1 - sci-biology/signalp/metadata.xml | 8 ------ sci-biology/signalp/signalp-3.0.ebuild | 46 ---------------------------------- 4 files changed, 56 deletions(-) https://gitweb.gentoo.org/proj/sci.git/commit/?id=a60ef457ab7c7039a22d9dd04268748bd5e35c8f commit a60ef457ab7c7039a22d9dd04268748bd5e35c8f Author: Andrew Ammerlaan <andrewammerlaan@gentoo.org> AuthorDate: 2023-04-25 11:24:28 +0000 Commit: Andrew Ammerlaan <andrewammerlaan@gentoo.org> CommitDate: 2023-04-25 11:24:28 +0000 dev-lang/pgi: treeclean Bug: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org> dev-lang/pgi/Manifest | 1 - dev-lang/pgi/files/pgi-13.5-glibc.patch | 31 --------- dev-lang/pgi/files/pgi-13.5-terminal.patch | 39 ----------- dev-lang/pgi/metadata.xml | 15 ----- dev-lang/pgi/pgi-13.5.ebuild | 105 ----------------------------- profiles/package.mask | 1 - 6 files changed, 192 deletions(-) |