Summary: | sci-chemistry/pymol-1.5.0.3-r1 please stabilize | ||
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Product: | Gentoo Linux | Reporter: | Justin Lecher (RETIRED) <jlec> |
Component: | [OLD] Keywording and Stabilization | Assignee: | Justin Lecher (RETIRED) <jlec> |
Status: | RESOLVED FIXED | ||
Severity: | enhancement | Keywords: | STABLEREQ |
Priority: | Normal | ||
Version: | unspecified | ||
Hardware: | All | ||
OS: | Linux | ||
Whiteboard: | |||
Package list: | Runtime testing required: | --- |
Description
Justin Lecher (RETIRED)
2012-08-12 17:45:50 UTC
ago@amd64box ~ $ LC_ALL="C" pymol downloads/3ZUA.pdb Detected OpenGL version 2.0 or greater. Shaders available. Detected GLSL version 1.20. HEADER HYDROLASE 18-JUL-11 3ZUA TITLE INITIAL RECOGNITION STEPS OF THE TYPE I SECRETION SYSTEM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-HEMOLYSIN TRANSLOCATION ATP-BINDING PROTEIN HLYB; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CLD; COMPND 5 EC: 3.4.22.2; COMPND 6 ENGINEERED: YES ObjectMolecule: Read secondary structure assignments. ObjectMolecule: Read crystal symmetry information. Symmetry: Found 1 symmetry operators. ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 CmdLoad: "downloads/3ZUA.pdb" loaded as "3ZUA". python2.7: nv50_pc.h:351: nv_alloc_instruction: Assertion `pc->num_instructions < 2048' failed. /usr/bin/pymol: line 2: 2521 Aborted python2.7 -O ${PYMOL_PATH}/__init__.py -q $* How about it? never seen, but a quick google suggest it to be a mesa bug. could you please try to do cat >> ~/.pymolrc <<- EOF set use_shaders, 0 set sphere_mode, 0 EOF and try again? (In reply to comment #3) > could you please try to do > > cat >> ~/.pymolrc <<- EOF > set use_shaders, 0 > set sphere_mode, 0 > EOF > > and try again? works, can be stabilized? give me night to sleep about aka. I will dig for the severity. PLease go ahead. I will add a post inst notice. PLease go ahead. I will add a post inst notice. amd64 stable Stable ppc x86 stable, closing |