Bug 38853 - New ebuild phylip-3.6_beta
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Bug#:
38853
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Product: Gentoo Linux
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Version: unspecified
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Platform: x86
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OS/Version: Linux
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Status: RESOLVED
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Severity: enhancement
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Priority: P2
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Resolution: FIXED
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Assigned To: sci@gentoo.org
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Reported By: natunobilis@gentoobr.org
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Component: Ebuilds
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URL:
http://evolution.genetics.washington.edu/phylip.html
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Summary: New ebuild phylip-3.6_beta
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Keywords:
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Status Whiteboard:
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Opened: 2004-01-20 15:32 0000
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Phylip (PHYlogeny Inference Package) is a program package inferring
phylogenies, written by Joseph Felsenstein at the University of Washington.
Reproducible: Always
Steps to Reproduce:
1.
2.
3.
Apparently, I forgot to mention that although this is a beta version, the
program's author (all-mighty Joe Felsenstein) strongly encourages its use. Even
the alpha version was very reliable.
I think many scientists would not want to use this beta version for producing
results for publication. To make sure those who want can play with the beta
while, at the same time, keeping the old version, we could make this package
SLOTable.
Here are two ebuilds for versions 3.5 and 3.6_beta1 that use the SLOT feature.
Programs are installed in: /usr/phylip/3.x/bin. The relevant directory is added
to PATH through the env file 24phylip. If both packages are installed, 24phylip
adds the last installed version to PATH. Every user can override this by adding
"export PATH=/usr/phylip/3.x/bin:$PATH" to his .bashrc.
Created an attachment (id=32441) [details]
phylip-3.6_beta1.ebuild - Corrected SLOTable ebuild
There was a bug in my first 2.6 beta ebuild (I used PV instead of SLOT for
determining DESTDIR, and PV includes the _beta1 part of the version). This
corrected ebuild fixes that.
Commited the new stable 3.6 version.
