65708 2004-09-28 11:28 0000 cernlib-2005.ebuild (New package) 2007-08-26 13:30:09 0000 1 1 1 Unclassified Gentoo Linux Ebuilds 2006.0 All All RESOLVED FIXED EBUILD P2 enhancement --- 1 bicatali@gentoo.org sci@gentoo.org bicatali@gentoo.org marco.calviani@gmail.com pmbarros@gmail.com _hamlet@libero.it bicatali@gentoo.org 2004-09-28 11:28:41 0000 The full CERN program library compiled from sources. It includes a variety of data analysis packages, PAW, minuit, geant, very commonly used in High Energy Physics. bicatali@gentoo.org 2004-09-28 11:29:21 0000 Created an attachment (id=40643) cernlib-2003.ebuild cryos@gentoo.org 2005-04-06 09:13:09 0000 I have been looking at this, but unfortunately it fails for me here quite early on. This is on amd64 with the new 2005.0 profile. I will test it on x86 when I get chance too, but it does not seem to be ready for amd64. Alse the make tests should be moved to src_test, and this package could benefit from local USE flags to choose which components are built. I would like to see this added to portage though. I tested the 2004 sources. Error is below for your information, gmake[3]: Leaving directory `/var/tmp/portage/cernlib-2004/work/2004/build/packlib/cspack/xz' checking /packlib/cspack/tcpaw gmake[3]: Entering directory `/var/tmp/portage/cernlib-2004/work/2004/build/packlib/cspack/tcpaw' Makefile:454: archive/tcpaw.d: No such file or directory makedepend -farchive/tcpaw.d.tmp -p archive/ -- -I/var/tmp/portage/cernlib-2004/work/2004/build/packlib/cspack -I/var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack -I/var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw -I/var/tmp/portage/cernlib-2004/work/2004/src/include -DFUNCPROTO=15 -DNARROWPROTO -DCERNLIB_LINUX -DCERNLIB_UNIX -DCERNLIB_LNX -DCERNLIB_QMGLIBC -DCERNLIB_QMLXIA64 /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c makedepend: warning: /usr/include/gentoo-multilib/amd64/gnu/stubs.h: non-portable whitespace encountered at line 7 gmake[3]: Leaving directory `/var/tmp/portage/cernlib-2004/work/2004/build/packlib/cspack/tcpaw' gmake[3]: Entering directory `/var/tmp/portage/cernlib-2004/work/2004/build/packlib/cspack/tcpaw' rm -f archive/tcpaw.o gcc -c -O1 -fomit-frame-pointer -I/var/tmp/portage/cernlib-2004/work/2004/build/packlib/cspack -I/var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack -I/var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw -I/var/tmp/portage/cernlib-2004/work/2004/src/include -DFUNCPROTO=15 -DNARROWPROTO -DCERNLIB_LINUX -DCERNLIB_UNIX -DCERNLIB_LNX -DCERNLIB_QMGLIBC -DCERNLIB_QMLXIA64 /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c -o archive/tcpaw.o /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:1738:13: warning: trigraph ??( ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:1738:18: warning: trigraph ??) ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2196:10: warning: trigraph ??( ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2196:14: warning: trigraph ??) ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2202:12: warning: trigraph ??( ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2202:16: warning: trigraph ??) ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2203:10: warning: trigraph ??( ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2203:14: warning: trigraph ??) ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2216:9: warning: trigraph ??( ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2216:13: warning: trigraph ??) ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2219:37: warning: trigraph ??( ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2219:41: warning: trigraph ??) ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2220:11: warning: trigraph ??( ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2220:15: warning: trigraph ??) ignored, use -trigraphs to enable /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c: In function `isetup': /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:518: warning: passing arg 2 of `getpeername' from incompatible pointer type /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c: In function `ssetup': /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:797: warning: passing arg 2 of `bind' from incompatible pointer type /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:826: warning: passing arg 2 of `accept' from incompatible pointer type /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c: In function `csetup': /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:1287: warning: passing arg 2 of `connect' from incompatible pointer type /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:1310: warning: passing arg 2 of `getsockname' from incompatible pointer type /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c: At top level: /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2368: error: conflicting types for 'malloc' /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2368: error: conflicting types for 'malloc' /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c: In function `ruserpass': /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2386: warning: assignment makes integer from pointer without a cast /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c: At top level: /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2415: warning: static declaration of 'rnetrc' follows non-static declaration /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2378: warning: previous implicit declaration of 'rnetrc' was here /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2495: warning: static declaration of 'token' follows non-static declaration /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2438: warning: previous implicit declaration of 'token' was here /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2547: error: conflicting types for 'ioctl' /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2547: note: a parameter list with an ellipsis can't match an empty parameter name list declaration /usr/include/sys/../gentoo-multilib/amd64/sys/ioctl.h:42: error: previous declaration of 'ioctl' was here /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2547: error: conflicting types for 'ioctl' /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2547: note: a parameter list with an ellipsis can't match an empty parameter name list declaration /usr/include/sys/../gentoo-multilib/amd64/sys/ioctl.h:42: error: previous declaration of 'ioctl' was here /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2614: warning: static declaration of 'catch' follows non-static declaration /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2570: warning: previous declaration of 'catch' was here /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c: In function `_rexec': /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:2682: warning: passing arg 2 of `connect' from incompatible pointer type /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c: In function `tsosub': /var/tmp/portage/cernlib-2004/work/2004/src/packlib/cspack/tcpaw/tcpaw.c:3346: warning: passing arg 2 of `connect' from incompatible pointer type gmake[3]: *** [archive/tcpaw.o] Error 1 gmake[3]: Leaving directory `/var/tmp/portage/cernlib-2004/work/2004/build/packlib/cspack/tcpaw' gmake[2]: *** [tcpaw/archive/objects.list] Error 2 gmake[2]: Leaving directory `/var/tmp/portage/cernlib-2004/work/2004/build/packlib/cspack' gmake[1]: *** [cspack/archive/objects.list] Error 2 gmake[1]: Leaving directory `/var/tmp/portage/cernlib-2004/work/2004/build/packlib' make: *** [install.lib] Error 2 !!! ERROR: sci-libs/cernlib-2004 failed. !!! Function src_compile, Line 78, Exitcode 2 !!! make failed !!! If you need support, post the topmost build error, NOT this status message. phosphan@gentoo.org 2006-02-02 23:46:07 0000 Looking at SRC_URI I wonder if this shouldn't better be split into its parts. bicatali@gentoo.org 2006-02-03 00:53:54 0000 In reply to comments #3: Yes it could for sure, although very tricky. There is a lot of inter-dependencies between each source. I just have not yet got the courage and time to deep more into this package. My idea was to also get the nice patches from the debian package (See http://people.debian.org/~kmccarty/cernlib/), write an eclass, and split into 4 packages: cernlib-core, cernlib-geant, cernlib-paw, and cernlib-mc. Well the patches are also inter-dependent. If anyone is interested in working out this package, I have a early eclass prototype. Note each of the source has some licensing problems as well. marco.calviani@gmail.com 2006-02-04 06:05:27 0000 Hi, i'm having trouble compiling cernlib. In particular it gives me errors in the phase of make -k install.bin with this result: rm -f /home/mirtux/cernlib_2005_source/tar/2005/bin/paw install -c -s /home/mirtux/cernlib_2005_source/tar/2005/src/scripts/paw /home/mirtux/cernlib_2005_source/tar/2005/bin/paw strip: /home/mirtux/cernlib_2005_source/tar/2005/bin/paw: File format not recognized install: strip failed gmake: *** [/home/mirtux/cernlib_2005_source/tar/2005/bin/paw] Error 1 gmake: Target `install.bin' not remade because of errors. rm -f /home/mirtux/cernlib_2005_source/tar/2005/bin/cernlib install -c -s /home/mirtux/cernlib_2005_source/tar/2005/src/scripts/cernlib /home/mirtux/cernlib_2005_source/tar/2005/bin/cernlib strip: /home/mirtux/cernlib_2005_source/tar/2005/bin/cernlib: File format not recognized install: strip failed gmake: *** [/home/mirtux/cernlib_2005_source/tar/2005/bin/cernlib] Error 1 gmake: Target `install.bin' not remade because of errors. rm -f /home/mirtux/cernlib_2005_source/tar/2005/bin/gxint install -c -s /home/mirtux/cernlib_2005_source/tar/2005/src/scripts/gxint /home/mirtux/cernlib_2005_source/tar/2005/bin/gxint strip: /home/mirtux/cernlib_2005_source/tar/2005/bin/gxint: File format not recognized install: strip failed gmake: *** [/home/mirtux/cernlib_2005_source/tar/2005/bin/gxint] Error 1 gmake: Target `install.bin' not remade because of errors. Any hints? Regards, MC marco.calviani@gmail.com 2006-02-05 02:11:57 0000 (In reply to comment #5) thanks to spyderous's suggestion, i've managed to install it. I had to modify the scripts/Makefile in order to eliminate the -s option to the INSTPGMFLAGS variable. After that the compile process went well. Regards, MC marco.calviani@gmail.com 2006-03-13 11:19:28 0000 Hi, i'm trying to build on another machine that has gcc 3.4.5. During the make phase i'm encountering this problem: g77 -c -O -fno-automatic -fno-second-underscore -fugly-complex -I/usr/local/cernlib/2005/build/mclibs/cojets -I/usr/local/cernlib/2005/src/mclibs/cojets -I/usr/local/cernlib/2005/src/mclibs/cojets/code -I/usr/local/cernlib/2005/src/include -DCERNLIB_LINUX -DCERNLIB_UNIX -DCERNLIB_LNX -DCERNLIB_QMGLIBC -o archive/bgpair.o /usr/local/cernlib/2005/src/mclibs/cojets/code/bgpair.F /usr/local/cernlib/2005/src/mclibs/cojets/code/bgpair.F: In subroutine `bgpair': /usr/local/cernlib/2005/src/mclibs/cojets/code/bgpair.F:34: [\0] ^ Null character at (^) -- line ignored /usr/local/cernlib/2005/src/mclibs/cojets/code/bgpair.F:34: [\0] DO 8 J=6,7 ^ Invalid first character at (^) [info -f g77 M LEX] gmake[3]: *** [archive/bgpair.o] Error 1 gmake[3]: Leaving directory `/usr/local/cernlib/2005/build/mclibs/cojets/code' gmake[2]: *** [code/archive/objects.list] Error 2 gmake[2]: Leaving directory `/usr/local/cernlib/2005/build/mclibs/cojets' gmake[1]: *** [install.lib] Error 2 gmake[1]: Leaving directory `/usr/local/cernlib/2005/build/mclibs' make: *** [install.lib] Error 2 What can be the cause of this problem? Regards, MC bicatali@gentoo.org 2006-04-22 13:27:44 0000 I updated the ebuild and put it on the gentoo scientific overlay: http://gentooscience.org. I decided to install the package as a whole, with the full debian patch set, which allows to build it in several architectures (among many other improvements). Splitting the package was asking too much for a package with such a nasty installation procedure with little time I want to spend on it. I tested on amd64 and x86. Test and report in this bug. jakub@gentoo.org 2006-06-23 07:00:03 0000 *** Bug 137730 has been marked as a duplicate of this bug. *** jakub@gentoo.org 2007-05-04 16:04:30 0000 *** Bug 177047 has been marked as a duplicate of this bug. *** oystnsh@online.no 2007-07-02 15:41:47 0000 It seems like cernlib depends on x11-misc/makedepend. This change made it compile for me: --- cernlib-2006-r1.ebuild.old 2007-07-02 19:22:01.000000000 +0200 +++ cernlib-2006-r1.ebuild 2007-07-02 19:20:46.000000000 +0200 @@ -5,7 +5,8 @@ DEB_PV="${PV}.dfsg.2" DEB_PR="1" inherit cernlib -DEPEND="app-admin/eselect-blas" +DEPEND="app-admin/eselect-blas + x11-misc/makedepend" KEYWORDS="~x86 ~amd64" src_unpack() { bicatali@gentoo.org 2007-08-26 13:30:09 0000 cernlib-2006 along with derived packages (paw, geant and cernlib-montecarlo) in main tree. 40643 2004-09-28 11:29 0000 cernlib-2003.ebuild cernlib-2003.ebuild text/plain IyBDb3B5cmlnaHQgMTk5OS0yMDA0IEdlbnRvbyBGb3VuZGF0aW9uCiMgRGlzdHJpYnV0ZWQgdW5k ZXIgdGhlIHRlcm1zIG9mIHRoZSBHTlUgR2VuZXJhbCBQdWJsaWMgTGljZW5zZSB2MgojICRIZWFk ZXIkCgpSRVNUUklDVD0ibm9zdHJpcCBub21pcnJvciIKSVVTRT0iIgpIT01FUEFHRT0iaHR0cDov L3d3d2FzZC53ZWIuY2Vybi5jaC93d3dhc2QvY2VybmxpYiIKU1JDX1BBVEg9Imh0dHA6Ly9jZXJu bGliLndlYi5jZXJuLmNoL2Nlcm5saWIvZG93bmxvYWQvJHtQVn1fc291cmNlL3RhciIKU1JDX1VS 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