221159 2008-05-10 05:28 0000 sci-biology/biopython-1.44: stabilization request 2008-07-14 16:58:04 0000 1 1 1 Unclassified Gentoo Linux Development unspecified All Linux RESOLVED FIXED STABLEREQ P2 normal --- 1 mmokrejs@ribosome.natur.cuni.cz sci-biology@gentoo.org ppc@gentoo.org ribosome@gentoo.org mmokrejs@ribosome.natur.cuni.cz 2008-05-10 05:28:07 0000 Please stabilize for x86 and amd64 ribosome@gentoo.org 2008-07-06 15:22:34 0000 Stable on amd64. Other arches: Please stabilise this version. You can test a Biopython installation in an interactive Python interpreter by typing the following commands: >>> from Bio.Seq import Seq >>> from Bio.Alphabet.IUPAC import unambiguous_dna >>> new_seq = Seq('GATCAGAAG', unambiguous_dna) >>> new_seq[0:2] Seq('GA', IUPACUnambiguousDNA()) >>> from Bio import Translate >>> translator = Translate.unambiguous_dna_by_name["Standard"] >>> translator.translate(new_seq) Seq('DQK', HasStopCodon(IUPACProtein(), '*')) Martin: Thanks for the notice. You might also want to check version 1.47 that I just added to the tree. armin76@gentoo.org 2008-07-07 15:50:12 0000 alpha/sparc/x86 stable nixnut@gentoo.org 2008-07-14 16:58:04 0000 ppc stable. closing since we're last