145467 2006-08-29 05:33 0000 sci-chemistry/vmd sucsessfuly compiled on ~amd64 2007-01-07 23:31:14 0000 1 1 1 Unclassified Gentoo Linux Ebuilds 2006.0 All Linux RESOLVED FIXED P2 enhancement --- 147983 1 alexxy@gentoo.org amd64@gentoo.org gentoo-bugzilla@moinmarco.de markusle@gentoo.org alexxy@gentoo.org 2006-08-29 05:33:43 0000 Vmd 1.8.4 and 1.8.5 can be build on x86_64 systems (at least with gcc-4.1.1 and binutils 2.17) alexxy@gentoo.org 2006-08-29 05:34:31 0000 *** Bug 142181 has been marked as a duplicate of this bug. *** alexxy@gentoo.org 2006-08-29 05:36:20 0000 *** Bug 145468 has been marked as a duplicate of this bug. *** gentoo-bugzilla@moinmarco.de 2006-09-17 14:01:54 0000 Compiles and runs on amd64. This needs sci-biology/stride-20011129, see bug #147983 emerge --info Portage 2.1.1 (default-linux/amd64/2006.1, gcc-4.1.1, glibc-2.4-r3, 2.6.17-gentoo-r8 x86_64) ================================================================= System uname: 2.6.17-gentoo-r8 x86_64 AMD Athlon(tm) 64 Processor 3000+ Gentoo Base System version 1.12.5 Last Sync: Sun, 17 Sep 2006 15:20:01 +0000 app-admin/eselect-compiler: [Not Present] dev-java/java-config: 1.3.6-r1, 2.0.28-r1 dev-lang/python: 2.3.5-r2, 2.4.3-r1 dev-python/pycrypto: 2.0.1-r5 dev-util/ccache: [Not Present] dev-util/confcache: [Not Present] sys-apps/sandbox: 1.2.17 sys-devel/autoconf: 2.13, 2.59-r7 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2 sys-devel/binutils: 2.16.1-r3 sys-devel/gcc-config: 1.3.13-r3 sys-devel/libtool: 1.5.22 virtual/os-headers: 2.6.11-r2 ACCEPT_KEYWORDS="amd64" AUTOCLEAN="yes" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=athlon64 -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/" CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/gconf /etc/java-config/vms/ /etc/revdep-rebuild /etc/terminfo" CXXFLAGS="-march=athlon64 -O2 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig distlocks metadata-transfer sandbox sfperms strict" GENTOO_MIRRORS="http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ http://gentoo.zie.pg.gda.pl" LANG="en_US.utf8" LINGUAS="en de" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'" PORTAGE_TMPDIR="/mnt/portage/var/tmp" PORTDIR="/mnt/portage/usr-portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.de.gentoo.org/gentoo-portage" USE="amd64 X a52 aac alsa berkdb bitmap-fonts bzip2 cdr cli crypt cscope dlloader dri dvd dvdr elibc_glibc emacs encode flac fortran gif gmp gnutls gpm gtk gtk2 imap imlib input_devices_keyboard input_devices_mouse isdnlog java joystick jpeg kde kernel_linux libg++ linguas_de linguas_en lua mad matroska mbox mng mp3 mpeg ncurses nls nntp nptl nptlonly offensive ogg opengl pam pcre pdf perl png ppds pppd python qt qt3 quicktime readline reflection ruby sasl sdl session slang speex spell spl ssl svg tcpd theora tiff truetype truetype-fonts type1-fonts udev unicode userland_GNU video_cards_fbdev video_cards_radeon video_cards_vesa vorbis xorg xpm xv xvid zlib" Unset: CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LDFLAGS, PORTAGE_RSYNC_EXTRA_OPTS markusle@gentoo.org 2007-01-04 08:38:56 0000 The sci-team has marked VMD ~amd64. Hence this bug can be closed. Enjoy VMD:) Thanks, Markus gentoo-bugzilla@moinmarco.de 2007-01-05 06:39:36 0000 Created an attachment (id=105528) patch for sed line when CC or CXX contains a / I tried to reinstall from gentoo-x86 instead of my local overlay. Unfortunately i now have CC=/usr/lib/ccache/bin/gcc and this doesn't play well with one of the sed lines that uses '/' as delimiter. The attached patch changes the sed line to use ':'. gentoo-bugzilla@moinmarco.de 2007-01-05 06:51:23 0000 Created an attachment (id=105530) patch for sed line when CC or CXX contains a / I tried to reinstall from gentoo-x86 instead of my local overlay. Unfortunately i now have CC=/usr/lib/ccache/bin/gcc and this doesn't play well with one of the sed lines that uses '/' as delimiter. The attached patch changes the sed line to use ':'. markusle@gentoo.org 2007-01-07 17:39:30 0000 Hi Marco, Thanks! I've changed the ebuild correspondingly. Best, Markus 105528 2007-01-05 06:39 0000 patch for sed line when CC or CXX contains a / vmd.patch text/plain LS0tIC91c3IvcG9ydGFnZS9zY2ktY2hlbWlzdHJ5L3ZtZC92bWQtMS44LjUuZWJ1aWxkCTIwMDct MDEtMDMgMTY6MDY6MTcuMDAwMDAwMDAwICswMTAwCisrKyAvdXNyL2xvY2FsL3BvcnRhZ2Uvc2Np LWNoZW1pc3RyeS92bWQvdm1kLTEuOC41LmVidWlsZAkyMDA3LTAxLTA1IDE1OjE3OjI3LjAwMDAw MDAwMCArMDEwMApAQCAtNDgsMTMgKzQ4LDEzIEBACiAKIAljZCAiJHtXT1JLRElSfSIvcGx1Z2lu cwogCi0Jc2VkIC1lICJzL0NDID0gZ2NjL0NDID0gJCh0Yy1nZXRDQykvIiBcCi0JICAgIC1lICJz L0NYWCA9IGcrKy9DWFggPSAkKHRjLWdldENYWCkvIiBcCi0JCS1lICJzL0NPUFRPID0gLW8gL0NP UFRPID0gLWZQSUMgLW8gLyIgXAotCQktZSAicy9MT1BUTyA9IC1vIC9MT1BUTyA9IC1mUElDIC1v IC8iIFwKLQkJLWUgInMvQ0NGTEFHUyA9IC1PMiAtV2FsbC9DQ0ZMQUdTID0gJHtDRkxBR1N9LyIg XAotCQktZSAicy9DWFhGTEFHUyA9IC1PMiAtV2FsbC9DWFhGTEFHUyA9ICR7Q1hYRkxBR1N9LyIg XAotCQktZSAicy9TSExEID0gZ2NjL1NITEQgPSAkKHRjLWdldENDKS8iIFwKKwlzZWQgLWUgInM6 Q0MgPSBnY2M6Q0MgPSAkKHRjLWdldENDKToiIFwKKwkgICAgLWUgInM6Q1hYID0gZysrOkNYWCA9 ICQodGMtZ2V0Q1hYKToiIFwKKwkJLWUgInM6Q09QVE8gPSAtbyA6Q09QVE8gPSAtZlBJQyAtbyA6 IiBcCisJCS1lICJzOkxPUFRPID0gLW8gOkxPUFRPID0gLWZQSUMgLW8gOiIgXAorCQktZSAiczpD Q0ZMQUdTID0gLU8yIC1XYWxsOkNDRkxBR1MgPSAke0NGTEFHU306IiBcCisJCS1lICJzOkNYWEZM QUdTID0gLU8yIC1XYWxsOkNYWEZMQUdTID0gJHtDWFhGTEFHU306IiBcCisJCS1lICJzOlNITEQg PSBnY2M6U0hMRCA9ICQodGMtZ2V0Q0MpOiIgXAogCSAgICAtaSBNYWtlLWFyY2ggfHwgZGllICJG YWlsZWQgdG8gc2V0IHVwIHBsdWdpbnMgTWFrZWZpbGUiCiAKIAkjIHByZXBhcmUgdm1kIGl0c2Vs Zgo= 105530 2007-01-05 06:51 0000 patch for sed line when CC or CXX contains a / vmd.patch text/plain LS0tIC91c3IvcG9ydGFnZS9zY2ktY2hlbWlzdHJ5L3ZtZC92bWQtMS44LjUuZWJ1aWxkCTIwMDct MDEtMDMgMTY6MDY6MTcuMDAwMDAwMDAwICswMTAwCisrKyAvdXNyL2xvY2FsL3BvcnRhZ2Uvc2Np LWNoZW1pc3RyeS92bWQvdm1kLTEuOC41LmVidWlsZAkyMDA3LTAxLTA1IDE1OjE3OjI3LjAwMDAw MDAwMCArMDEwMApAQCAtNDgsMTMgKzQ4LDEzIEBACiAKIAljZCAiJHtXT1JLRElSfSIvcGx1Z2lu cwogCi0Jc2VkIC1lICJzL0NDID0gZ2NjL0NDID0gJCh0Yy1nZXRDQykvIiBcCi0JICAgIC1lICJz L0NYWCA9IGcrKy9DWFggPSAkKHRjLWdldENYWCkvIiBcCi0JCS1lICJzL0NPUFRPID0gLW8gL0NP UFRPID0gLWZQSUMgLW8gLyIgXAotCQktZSAicy9MT1BUTyA9IC1vIC9MT1BUTyA9IC1mUElDIC1v IC8iIFwKLQkJLWUgInMvQ0NGTEFHUyA9IC1PMiAtV2FsbC9DQ0ZMQUdTID0gJHtDRkxBR1N9LyIg XAotCQktZSAicy9DWFhGTEFHUyA9IC1PMiAtV2FsbC9DWFhGTEFHUyA9ICR7Q1hYRkxBR1N9LyIg XAotCQktZSAicy9TSExEID0gZ2NjL1NITEQgPSAkKHRjLWdldENDKS8iIFwKKwlzZWQgLWUgInM6 Q0MgPSBnY2M6Q0MgPSAkKHRjLWdldENDKToiIFwKKwkgICAgLWUgInM6Q1hYID0gZysrOkNYWCA9 ICQodGMtZ2V0Q1hYKToiIFwKKwkJLWUgInM6Q09QVE8gPSAtbyA6Q09QVE8gPSAtZlBJQyAtbyA6 IiBcCisJCS1lICJzOkxPUFRPID0gLW8gOkxPUFRPID0gLWZQSUMgLW8gOiIgXAorCQktZSAiczpD Q0ZMQUdTID0gLU8yIC1XYWxsOkNDRkxBR1MgPSAke0NGTEFHU306IiBcCisJCS1lICJzOkNYWEZM QUdTID0gLU8yIC1XYWxsOkNYWEZMQUdTID0gJHtDWFhGTEFHU306IiBcCisJCS1lICJzOlNITEQg PSBnY2M6U0hMRCA9ICQodGMtZ2V0Q0MpOiIgXAogCSAgICAtaSBNYWtlLWFyY2ggfHwgZGllICJG YWlsZWQgdG8gc2V0IHVwIHBsdWdpbnMgTWFrZWZpbGUiCiAKIAkjIHByZXBhcmUgdm1kIGl0c2Vs Zgo=