141438 2006-07-22 14:48 0000 [gcc41] sci-libs/lapack-atlas-3.7.11 stable request 2006-09-12 04:02:52 0000 1 1 1 Unclassified Gentoo Linux GCC Porting unspecified All Linux RESOLVED FIXED P2 normal --- 140707 141440 141446 1 dirtyepic@gentoo.org amd64@gentoo.org sci@gentoo.org dirtyepic@gentoo.org 2006-07-22 14:48:53 0000 current stable sci-libs/lapack-atlas-3.6.0 fails to build with GCC 4.1. if possible, please stabilize >=sci-libs/lapack-atlas-3.7.11 or backport the eclass fix from ~arch so we can work on getting GCC 4.1 into stable. thanks ;d dberkholz@gentoo.org 2006-08-05 13:16:08 0000 We could probably stabilize the atlas 3.7 stuff, it's been running quite stable on multiple machines here. Anybody else got input? markusle@gentoo.org 2006-08-05 14:27:43 0000 I'd be absolutely for it. Upstream recommends the development versions anyway due to much better support of newer CPUs; 3.6.0 is fairly old by now. 3.7.12 just came out a few weeks ago with fairly significant changes to the build system; hence, 3.7.11 is probably a good candidate for the new stable branch. Markus wolf31o2@gentoo.org 2006-08-08 16:00:43 0000 Feel free to CC the arches when you're ready for us to do our foo. At minimu, amd64, ppc, and x86 will need this either currently (ppc) or in the very near future. dberkholz@gentoo.org 2006-08-08 16:10:53 0000 Mentioned this on another bug, but it deserves to be here too -- we need to fix the unmasked *-atlas ebuilds to use blas-config and lapack-config instead of the old eselect modules before stabling. dberkholz@gentoo.org 2006-08-20 15:56:18 0000 (In reply to comment #4) > Mentioned this on another bug, but it deserves to be here too -- we need to fix > the unmasked *-atlas ebuilds to use blas-config and lapack-config instead of > the old eselect modules before stabling. This is done. dirtyepic@gentoo.org 2006-08-27 19:26:40 0000 Any progress on this? We need this ASAP for bug #140707. If no response is made before Sept 1st we'll be taking it upon ourselves to CC archs and get this bug resolved. thanks :) thedude0001@gmx.de 2006-08-28 09:31:44 0000 While testing for bug 141446 I also tested this one on amd64. emerges fine :) emerge --info Portage 2.1-r2 (default-linux/amd64/2006.1/desktop, gcc-4.1.1, glibc-2.4-r3, 2.6.17-suspend2-r4Dudebox-Edition x86_64) ================================================================= System uname: 2.6.17-suspend2-r4Dudebox-Edition x86_64 AMD Athlon(tm) 64 Processor 3200+ Gentoo Base System version 1.12.4 ccache version 2.3 [enabled] app-admin/eselect-compiler: [Not Present] dev-lang/python: 2.4.3-r1 dev-python/pycrypto: 2.0.1-r5 dev-util/ccache: 2.3 dev-util/confcache: [Not Present] sys-apps/sandbox: 1.2.17 sys-devel/autoconf: 2.13, 2.59-r7 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2 sys-devel/binutils: 2.16.1-r3 sys-devel/gcc-config: 1.3.13-r3 sys-devel/libtool: 1.5.22 virtual/os-headers: 2.6.11-r2 ACCEPT_KEYWORDS="amd64" AUTOCLEAN="yes" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=k8 -msse3 -Os -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config" CONFIG_PROTECT_MASK="/etc/env.d /etc/gconf /etc/terminfo" CXXFLAGS="-march=k8 -msse3 -Os -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig ccache collision-protect distlocks metadata-transfer multilib-strict parallel-fetch sandbox sfperms strict test userfetch userpriv usersandbox" GENTOO_MIRRORS="ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://linux.rz.ruhr-uni-bochum.de/gentoo-mirror/ ftp:///ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/" LDFLAGS="-Wl,-O1" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" SYNC="rsync://server/gentoo-portage" USE="amd64 X alsa arts avi berkdb bitmap-fonts cairo cdr cli crypt cups dbus dlloader dri dvd dvdr eds emboss encode esd fam firefox fortran gdbm gif gnome gpm gstreamer gtk gtk2 hal isdnlog jpeg kde kdeenablefinal kdehiddenvisibility ldap libg++ mad mikmod mp3 mpeg ncurses nls nptl nptlonly ogg opengl oss pam pcre pdflib perl png ppds pppd python qt3 qt4 quicktime readline reflection sdl session spell spl ssl tcpd test truetype truetype-fonts type1-fonts udev unicode vorbis xml xorg xv zlib elibc_glibc input_devices_keyboard input_devices_mouse kernel_linux userland_GNU video_cards_radeon" Unset: CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LINGUAS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY jakub@gentoo.org 2006-09-02 05:38:23 0000 I don't see any objections from maintainers and the blas-config/lapack-config thing is done. CCing arches here. corsair@gentoo.org 2006-09-02 12:29:40 0000 ppc64 stable fauli@gentoo.org 2006-09-03 23:19:15 0000 with blas-atlas 3.7.11 1) emerges fine so far a) QA Notice: pre-stripped files found: /var/tmp/portage/lapack-atlas-3.7.11/image/usr/lib/lapack/atlas/liblapack.so.0.0.0 b) >>> Unpacking lapack-gentoo.patch to /var/tmp/portage/lapack-atlas-3.7.11/work unpack lapack-gentoo.patch: file format not recognized. Ignoring. 2) passes collision test Portage 2.1-r2 (default-linux/x86/2006.1/desktop, gcc-4.1.1, glibc-2.4-r3, 2.6.17-gentoo-r7 i686) ================================================================= System uname: 2.6.17-gentoo-r7 i686 AMD Athlon(tm) XP 2500+ Gentoo Base System version 1.12.4 app-admin/eselect-compiler: [Not Present] dev-lang/python: 2.4.3-r1 dev-python/pycrypto: 2.0.1-r5 dev-util/ccache: [Not Present] dev-util/confcache: [Not Present] sys-apps/sandbox: 1.2.17 sys-devel/autoconf: 2.13, 2.59-r7 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2 sys-devel/binutils: 2.16.1-r3 sys-devel/gcc-config: 1.3.13-r3 sys-devel/libtool: 1.5.22 virtual/os-headers: 2.6.11-r2 ACCEPT_KEYWORDS="x86" AUTOCLEAN="yes" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/X11/xkb" CONFIG_PROTECT_MASK="/etc/env.d /etc/gconf /etc/revdep-rebuild /etc/splash /etc/terminfo" CXXFLAGS="-O2" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig ccache collision-protect distlocks metadata-transfer parallel-fetch sandbox sfperms strict test" GENTOO_MIRRORS="ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo/" LANG="de_DE@euro" LC_ALL="de_DE@euro" LINGUAS="de" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.informatik.rwth-aachen.de/gentoo-portage" USE="x86 3dnow 3dnowext X Xaw3d a52 alsa arts artworkextra asf audiofile avi bash-completion beagle berkdb bidi bitmap-fonts bootsplash branding bzip2 cairo cdda cddb cdparanoia cdr cli cracklib crypt css cups curl custom-cflags dbus dga directfb divx4linux dlloader dri dts dvd dvdr dvdread dvi eds emacs emboss encode esd evo exif expat fam fat fbcon ffmpeg firefox fortran ftp gb gcj gdbm gif gnome gpm gstreamer gtk gtk2 gtkhtml hal icq idn imagemagick imap ipv6 isdnlog java javascript jikes jpeg jpeg2k ldap leim libg++ lm_sensors mad maildir matroska mbox mikmod mime mmx mmxext mng mono mp3 mpeg mpeg2 mule nautilus ncurses nforce2 nls nocardbus nptl nptlonly nsplugin nvidia objc ogg opengl pam pcre pdf pdflib perl plotutils pmu png ppds pppd preview-latex print python qt3 qt4 quicktime readline reflection reiserfs samba sdk session slang spell spl sse ssl svg svga t1lib tcltk tcpd tetex theora thunderbird tiff truetype truetype-fonts type1-fonts udev usb vcd videos vorbis win32codecs wmf wxwindows xine xml xorg xosd xv xvid zlib elibc_glibc input_devices_mouse input_devices_keyboard kernel_linux linguas_de userland_GNU video_cards_radeon video_cards_vesa video_cards_fbdev" Unset: CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LDFLAGS, PORTAGE_RSYNC_EXTRA_OPTS wormo@gentoo.org 2006-09-04 13:39:49 0000 The compile seemed to work on ppc, but I'm having much fun trying to get the tests to compile. Even when I override all the bogus compiler opts, it wants to link against a static lapack_<PLATFORM>.a which does not exist. wormo@gentoo.org 2006-09-04 15:58:18 0000 finally got the tests to run: cd LAPACK cp /usr/lib/lapack/atlas/liblapack.a lapack_PPC.a cd TESTING make PLAT=_PPC FORTRAN="libtool --mode=compile --tag=F77 g77" OPTS="-O2 -pipe" LOADER="libtool --mode=link --tag=F77 g77" LOADOPTS="" BLASLIB="-lblas -lcblas" Everything looks ok, so stable on ppc. tsunam@gentoo.org 2006-09-07 21:10:59 0000 fixing the prestripped files would be nice (hint hint science herd)..but its stable on x86 blubb@gentoo.org 2006-09-12 04:02:52 0000 we're done here