112410 2005-11-13 06:26 0000 lapack-reference-3.0-r1 fails to compile with ifc due to "cbdsqr.lo: file not recognized: File format not recognized" 2005-11-15 19:58:13 0000 1 1 1 Unclassified Gentoo Linux Applications unspecified x86 Linux RESOLVED FIXED P2 normal --- 1 chris.zapart@yahoo.co.uk sci@gentoo.org chris.zapart@yahoo.co.uk 2005-11-13 06:26:05 0000 emerging a newer lapack-reference-3.0-r1 produced compilation errors due to linking problems: libtool --mode=compile --tag=F77 ifc -O3 -xP -ip -mtune=pentium4 -i_dynamic -c izmax1.f ifc -O3 -xP -ip -mtune=pentium4 -i_dynamic -c izmax1.f -fPIC -o .libs/izmax1.o ifortbin: Command line warning: ignoring option '-mt'; no argument required ifc -O3 -xP -ip -mtune=pentium4 -i_dynamic -c izmax1.f -o izmax1.o >/dev/null 2>&1 libtool --mode=compile --tag=F77 ifc -O3 -xP -ip -mtune=pentium4 -i_dynamic -c dzsum1.f ifc -O3 -xP -ip -mtune=pentium4 -i_dynamic -c dzsum1.f -fPIC -o .libs/dzsum1.o ifortbin: Command line warning: ignoring option '-mt'; no argument required ifc -O3 -xP -ip -mtune=pentium4 -i_dynamic -c dzsum1.f -o dzsum1.o >/dev/null 2>&1 ifortbin: Command line warning: ignoring option '-mt'; no argument required cbdsqr.lo: file not recognized: File format not recognized !!! ERROR: sci-libs/lapack-reference-3.0-r1 failed. !!! Function src_compile, Line 85, Exitcode 1 !!! (no error message) !!! If you need support, post the topmost build error, NOT this status message. The same problem has been encountered in upgrading the blas-reference package. A solution (a patch for blas-reference) has been included in the bug report http://bugs.gentoo.org/show_bug.cgi?id=112390 Reproducible: Always Steps to Reproduce: 1. 2. 3. Portage 2.0.51.22-r3 (default-linux/x86/2005.1, gcc-3.3.6, glibc-2.3.5-r2, 2.6.13-gentoo-r5 i686) ================================================================= System uname: 2.6.13-gentoo-r5 i686 Intel(R) Pentium(R) 4 CPU 3.00GHz Gentoo Base System version 1.6.13 distcc 2.18.3 i686-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled] dev-lang/python: 2.3.5-r2, 2.4.2 sys-apps/sandbox: 1.2.12 sys-devel/autoconf: 2.13, 2.59-r6 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r1 sys-devel/binutils: 2.15.92.0.2-r10 sys-devel/libtool: 1.5.20 virtual/os-headers: 2.6.11-r2 ACCEPT_KEYWORDS="x86" AUTOCLEAN="yes" CBUILD="i686-pc-linux-gnu" CFLAGS="-O3 -xP -ip -mtune=pentium4 -i_dynamic -I /opt/intel/compiler90/include" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/2/share/config /usr/kde/3.4/env /usr/kde/3.4/share/config /usr/kde/3.4/shutdown /usr/kde/3/share/config /usr/lib/X11/xkb /usr/lib/mozilla/defaults/pref /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/ /var/qmail/control" CONFIG_PROTECT_MASK="/etc/gconf /etc/splash /etc/terminfo /etc/env.d" CXXFLAGS="-O3 -xP -ip -mtune=pentium4 -i_dynamic -I /opt/intel/compiler90/include" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig distlocks sandbox sfperms strict" GENTOO_MIRRORS="ftp://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ ftp://mirror.nutsmaas.nl/gentoo/ http://gd.tuwien.ac.at/opsys/linux/gentoo/ http://gentoo.tiscali.nl/gentoo/" LANG="en_GB.UTF-8" LINGUAS="en_GB" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage" USE="x86 X aac acl alsa apm arts audiofile avi berkdb bitmap-fonts bonobo bzip2 cdr cjk crypt cups curl divx4linux dvd eds emboss encode esd exif expat fam ffmpeg flac foomaticdb fortran gd gdbm gif glut gmp gnome gpm gstreamer gtk gtk2 gtkhtml guile idn ifc imagemagick imlib immqt-bc ipv6 java joystick jpeg junit kde lcms libg++ libwww lirc lua mad mikmod mjpeg mmx mmxext mng motif mozilla mp3 mpeg mysql nas ncurses nls nptl ogg oggvorbis openal opengl oss pam pcre pdflib perl png ppds python qt quicktime readline real recode scanner sdl spell sse sse2 sse3 ssl svga tcltk tcpd tetex threads tiff truetype truetype-fonts type1-fonts udev unicode usb vorbis win32codecs xine xml xml2 xmms xv xvid zlib video_cards_radeon linguas_en_GB userland_GNU kernel_linux elibc_glibc" Unset: ASFLAGS, CTARGET, LC_ALL, LDFLAGS markusle@gentoo.org 2005-11-13 10:48:24 0000 Created an attachment (id=72839) fix linking error for shared libs when using ifc Hi Chris, Thanks for the report. Looks like libtool is needed to link the shared libs in case of ifc (similar to your earlier report for blas-reference bug #112390). The attached patch fixes this for me, please give it a spin. Thanks! chris.zapart@yahoo.co.uk 2005-11-13 11:40:51 0000 Markus, Many thanks - the patch has fixed all compilation problems for lapack-reference too. It compiled with ifc and installed OK. Thanks Chris markusle@gentoo.org 2005-11-15 19:58:13 0000 Hi Chris, Thanks a lot for testing. The patch was applied to the lapack-reference-3.0-r2.ebuild in CVS. 72839 2005-11-13 10:48 0000 fix linking error for shared libs when using ifc lapack-reference-ifc-link-gentoo.patch text/plain LS0tIGdlbnRvby1kZXZlbG9wbWVudC9nZW50b28teDg2L3NjaS1saWJzL2xhcGFjay1yZWZlcmVu Y2UvbGFwYWNrLXJlZmVyZW5jZS0zLjAtcjEuZWJ1aWxkCTIwMDUtMTEtMTMgMDU6NDA6MjYuMDAw MDAwMDAwICswMDAwCisrKyBsYXBhY2stcmVmZXJlbmNlLTMuMC1yMS5lYnVpbGQJMjAwNS0xMS0x MyAxODowMTo1Mi4wMDAwMDAwMDAgKzAwMDAKQEAgLTgxLDggKzgxLDkgQEAKIAogCWlmIHVzZSBp ZmM7IHRoZW4KIAkJIyBJbnRlbCBwb3J0YWJpbGl0eSBsaWJyYXJ5IHRoYXQgcHJvdmlkZXMgdGhl IGV0aW1lIGZ1bmN0aW9uCi0JCSR7RkN9IC1zaGFyZWQgJHtGRkxBR1N9ICoubG8gJHtERVBfTElC U30gLVdsLC1zb25hbWUgXAotCQkJLVdsLGxpYmxhcGFjay5zby4wIC1vIGxpYmxhcGFjay5zby4w LjAuMCAtVmF4bGliIHx8IGRpZQorCQlsaWJ0b29sIC0tdGFnPUY3NyAtLW1vZGU9bGluayAke0ZD fSAtc2hhcmVkICR7RkZMQUdTfSAqLmxvIFwKKwkJCSR7REVQX0xJQlN9IC1XbCwtc29uYW1lIC1X bCxsaWJsYXBhY2suc28uMCBcCisJCQktbyBsaWJsYXBhY2suc28uMC4wLjAgLVZheGxpYiB8fCBk aWUKIAkJYXIgY3J1IGxpYmxhcGFjay5hICoubyB8fCBkaWUKIAkJcmFubGliIGxpYmxhcGFjay5h IHx8IGRpZQogCWVsc2UK