# Copyright 2002 Gentoo Technologies, Inc.
# Distributed under the terms of the GNU General Public License, v2 or later
# $Header: $

IUSE="mysql gd"

inherit perl-module debug

CATEGORY="app-sci"

# not actually untarred as bioperl-live
S="${WORKDIR}/bioperl-${PV}"

DESCRIPTION="The Bioperl Project is a collection of tools for bioinformatics, genomics and life science research."

HOMEPAGE="http://www.bioperl.org"
SRC_URI="http://bioperl.org/ftp/DIST/bioperl-1.2.tar.gz"

SLOT="0"
KEYWORDS="~x86 ~ppc ~sparc ~sparc64 ~alpha"
LICENSE="Artistic GPL-2"

DEPEND="${DEPEND}
	dev-perl/File-Temp
	dev-perl/Graph
	dev-perl/HTML-Parser
	dev-perl/IO-String
	dev-perl/IO-stringy
	dev-perl/Parse-RecDescent
	dev-perl/SOAP-Lite
	dev-perl/Storable
	dev-perl/XML-DOM
	dev-perl/XML-Parser
	dev-perl/XML-Writer
	dev-perl/XML-Twig
	dev-perl/libxml-perl
	dev-perl/libwww-perl
	dev-perl/Text-Shellwords
	gd? ( >=dev-perl/GD-1.32-r1 )
	mysql? ( >=dev-perl/DBD-mysql-2.1004-r3 )"

RDEPEND=${DEPEND}

# uncomment this if you'd like to access bioperl docs via man in addition to
# perldoc.
#src_unpack() {
#	unpack ${A}
#	cd ${S}
#	echo
#	einfo " Patching to build manified pods..."
#	echo
#	patch < ${FILESDIR}/${P}-manpage.diff
#}

src_compile() {
	# note: these echo's give the default values for testing.
	use mysql && (
		echo y
		echo test
		echo localhost
		echo undef
		echo undef
		) | perl-module_src_compile || perl-module_src_compile || die "compile failed"

	# this stable release should test ok
	perl-module_src_test || die "test failed"
}
src_install() {
	mydoc="AUTHORS BUGS FAQ"
	perl-module_src_install
}