sys-cluster:torque-6.0.3:20190211-163826.log

sys-cluster:torque-6.0.3:20190211-163826.log (text/plain), 10.52 KB, created by Toralf Förster on 2019-02-11 18:06:38 UTC

 * Package:    sys-cluster/torque-6.0.3
 * Repository: gentoo
 * Maintainer: [e-mail] [e-mail]
 * USE:        abi_x86_64 amd64 crypt elibc_glibc kernel_linux syslog userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Unpacking torque-6.0.3-1485300822_19e79ad.tar.gz to /var/tmp/portage/sys-cluster/torque-6.0.3/work
>>> Source unpacked in /var/tmp/portage/sys-cluster/torque-6.0.3/work
>>> Preparing source in /var/tmp/portage/sys-cluster/torque-6.0.3/work/torque-6.0.3-1485300822_19e79ad ...
 * Applying torque-6.0.3-fix-emptystring-comparison.patch ...
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sys-cluster/torque-6.0.3/work/torque-6.0.3-1485300822_19e79ad ...
 * econf: updating torque-6.0.3-1485300822_19e79ad/buildutils/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating torque-6.0.3-1485300822_19e79ad/buildutils/config.sub with /usr/share/gnuconfig/config.sub
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --libdir=/usr/lib64 --disable-gui --disable-tcl-qstat --enable-syslog --disable-server --disable-drmaa --disable-munge-auth --disable-nvidia-gpus --with-rcp=scp --disable-cpuset --disable-geometry-request --disable-cgroups --disable-autorun --disable-quickcommit --with-server-home=/var/spool/torque --with-environ=/etc/pbs_environment --with-default-server=localhost --disable-gcc-warnings --disable-silent-rules --with-tcp-retry-limit=2 --without-loadlibfile
configure: WARNING: unrecognized options: --disable-geometry-request
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether x86_64-pc-linux-gnu-g++ accepts -g... (cached) yes
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E
checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for make... make
checking for a BSD-compatible install... /usr/lib/portage/python3.6/ebuild-helpers/xattr/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking dependency style of x86_64-pc-linux-gnu-gcc... none
checking dependency style of x86_64-pc-linux-gnu-g++... none
checking whether x86_64-pc-linux-gnu-gcc and cc understand -c and -o together... yes
checking whether to enable maintainer-specific portions of Makefiles... no
fatal: not a git repository (or any parent up to mount point /var/tmp)
Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
checking for x86_64-pc-linux-gnu-pkg-config... /usr/bin/x86_64-pc-linux-gnu-pkg-config
checking pkg-config is at least version 0.9.0... yes
checking PBS machine type... linux
checking whether to turn on the AUTORUN_JOBS flag... no
checking whether to turn on the RESOURCEMAXDEFAULT flag... no
checking whether to turn on the QUICKCOMMIT flag... no
checking whether to include server and scheduler... no
checking whether to include the mom daemon... yes
checking whether to include the clients... yes
checking whether to build DRMAA lib... no
checking for ar... (cached) x86_64-pc-linux-gnu-ar
mv: cannot stat 'libtool': No such file or directory
./configure: line 12004: libtool: No such file or directory
mv: cannot stat 'libtool.old': No such file or directory
checking whether ln -s works... yes
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... none needed
checking whether yytext is a pointer... no
checking for bison... bison -y
checking for gtbl... gtbl
checking for gpic... no
checking for pic... pic
checking for groff... groff
checking whether to turn on the compilation of DEBUG code... no
checking whether to compile with debugging symbols... DEBUG_SYMBOLS=yes
before tweak CFLAGS=-O2 -pipe -march=native
mid tweak CFLAGS= -pipe -march=native
after tweak CFLAGS=-g  -pipe -march=native
before tweak CXXFLAGS=-g -O2 -pipe -march=native
mid tweak CXXFLAGS=-g -pipe -march=native
after tweak CXXFLAGS=-g -pipe -march=native
checking whether to disable strict gcc warnings... yes
checking for stat64... yes
checking for open64... yes
checking for lseek64... yes
./configure: line 12412: ac_fn_c_check_member: command not found
checking for struct stat64.st_mode... yes
checking if largefile compiles (looking at you, OSX)... checking for pthread_create in -lpthread... yes
checking for SSL_accept in -lssl... yes
checking for BN_init in -lcrypto... no
configure: error: TORQUE needs lib crypto (often openssl-devel) in order to build

!!! Please attach the following file when seeking support:
!!! /var/tmp/portage/sys-cluster/torque-6.0.3/work/torque-6.0.3-1485300822_19e79ad/config.log
 * ERROR: sys-cluster/torque-6.0.3::gentoo failed (configure phase):
 *   econf failed
 * 
 * Call stack:
 *               ebuild.sh, line  124:  Called src_configure
 *             environment, line 2981:  Called econf '--disable-gui' '--disable-tcl-qstat' '--enable-syslog' '--disable-server' '--disable-drmaa' '--disable-munge-auth' '--disable-nvidia-gpus' '--with-rcp=scp' '--disable-cpuset' '--disable-geometry-request' '--disable-cgroups' '--disable-autorun' '--disable-quickcommit' '--with-server-home=/var/spool/torque' '--with-environ=/etc/pbs_environment' '--with-default-server=localhost' '--disable-gcc-warnings' '--disable-silent-rules' '--with-tcp-retry-limit=2' '--without-loadlibfile'
 *        phase-helpers.sh, line  718:  Called __helpers_die 'econf failed'
 *   isolated-functions.sh, line  119:  Called die
 * The specific snippet of code:
 *   		die "$@"
 * 
 * If you need support, post the output of `emerge --info '=sys-cluster/torque-6.0.3::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sys-cluster/torque-6.0.3::gentoo'`.
 * The complete build log is located at '/var/log/portage/sys-cluster:torque-6.0.3:20190211-163826.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sys-cluster/torque-6.0.3/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sys-cluster/torque-6.0.3/temp/environment'.
 * Working directory: '/var/tmp/portage/sys-cluster/torque-6.0.3/work/torque-6.0.3-1485300822_19e79ad'
 * S: '/var/tmp/portage/sys-cluster/torque-6.0.3/work/torque-6.0.3-1485300822_19e79ad'