* Package: dev-lang/gdl-0.9.4  * Repository: gentoo  * Maintainer: sci@gentoo.org  * USE: abi_x86_64 amd64 eigen elibc_glibc fftw hdf hdf5 imagemagick kernel_linux netcdf openmp postscript proj python python_targets_python2_7 userland_GNU wxwidgets  * FEATURES: preserve-libs sandbox userpriv usersandbox >>> Unpacking source... >>> Unpacking gdl-0.9.4.tar.gz to /var/tmp/portage/dev-lang/gdl-0.9.4/work >>> Source unpacked in /var/tmp/portage/dev-lang/gdl-0.9.4/work >>> Preparing source in /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4 ... * Applying 0.9.2-antlr.patch ...  [ ok ] * Applying 0.9.2-include.patch ...  [ ok ] * Applying 0.9.2-proj4.patch ...  [ ok ] * Applying 0.9.2-semaphore.patch ...  [ ok ] * Applying 0.9.3-plwidth.patch ...  [ ok ] * Applying 0.9.4-gsl.patch ...  [ ok ] * Applying 0.9.4-python.patch ...  [ ok ] * Applying 0.9.4-reorder.patch ...  [ ok ] * Regenerating grammar ANTLR Parser Generator Version 2.7.7 (20141108) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20141108) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20141108) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20141108) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20141108) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20141108) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20141108) 1989-2005 >>> Source prepared. >>> Configuring source in /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4 ... >>> Working in BUILD_DIR: "/var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build" cmake --no-warn-unused-cli -C /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DMPICH=OFF -DBUNDLED_ANTLR=OFF -DX11=ON -Dfftw=ON -DFFTW=ON -DFftw=ON -DEIGEN3=ON -Dgrib=OFF -DGRIB=OFF -DGrib=OFF -Dgshhs=OFF -DGSHHS=OFF -DGshhs=OFF -Dhdf=ON -DHDF=ON -DHdf=ON -Dhdf5=ON -DHDF5=ON -DHdf5=ON -Dnetcdf=ON -DNETCDF=ON -DNetcdf=ON -Dopenmp=ON -DOPENMP=ON -DOpenmp=ON -DLIBPROJ4=ON -DPSLIB=ON -Dudunits=OFF -DUDUNITS=OFF -DUdunits=OFF -Dwxwidgets=ON -DWXWIDGETS=ON -DWxwidgets=ON -DGRAPHICSMAGICK=ON -DMAGICK=OFF -DPYTHON_MODULE=OFF -DPYTHON=OFF -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_INSTALL_DO_STRIP=OFF -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build/gentoo_rules.cmake -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build/gentoo_toolchain.cmake /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4 Not searching for unused variables given on the command line. loading initial cache file /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build/gentoo_common_config.cmake Re-run cmake no build system arguments CMake Warning (dev) in CMakeLists.txt: Syntax Warning in cmake code at /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4/CMakeLists.txt:550:55 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 4.8.3 -- The CXX compiler identification is GNU 4.8.3 -- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/mpicxx -- Check for working CXX compiler: /usr/bin/mpicxx -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Found PkgConfig: /usr/bin/x86_64-pc-linux-gnu-pkg-config (found version "0.28") -- Looking for dlopen in dl -- Looking for dlopen in dl - found -- Looking for malloc_zone_statistics -- Looking for malloc_zone_statistics - not found -- Looking for sbrk -- Looking for sbrk - found -- Looking for mallinfo -- Looking for mallinfo - found -- Looking for malloc.h -- Looking for malloc.h - found -- Looking for malloc/malloc.h -- Looking for malloc/malloc.h - not found -- Looking for locale.h -- Looking for locale.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stdlib.h -- Looking for stdlib.h - found -- Looking for string.h -- Looking for string.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for ext/stdio_filebuf.h -- Looking for ext/stdio_filebuf.h - not found -- Looking for dlfcn.h -- Looking for dlfcn.h - found -- Looking for inttypes.h -- Looking for inttypes.h - found -- Looking for nexttoward in m -- Looking for nexttoward in m - found -- Looking for mpi.h -- Looking for mpi.h - found -- Looking for wsyncup in /usr/lib64/libcurses.so -- Looking for wsyncup in /usr/lib64/libcurses.so - found -- Looking for cbreak in /usr/lib64/libncurses.so -- Looking for cbreak in /usr/lib64/libncurses.so - found -- Looking for rl_get_screen_size in /usr/lib64/libreadline.so;/usr/lib64/libhistory.so -- Looking for rl_get_screen_size in /usr/lib64/libreadline.so;/usr/lib64/libhistory.so - found -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Found PLPLOT: /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for c_plslabelfunc in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for c_plslabelfunc in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so - found -- Performing Test HAVE_PLPLOT_WIDTH -- Performing Test HAVE_PLPLOT_WIDTH - Success -- Looking for plstrl in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for plstrl in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so - found -- Looking for c_pllegend in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for c_pllegend in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so - found -- Found GRAPHICSMAGICK: /usr/lib64/libGraphicsMagick.so;/usr/lib64/libGraphicsMagick++.so -- checking for module 'netcdf' -- found netcdf, version 4.3.2 -- Found NETCDF: netcdf -- Looking for C++ include netcdf.h -- Looking for C++ include netcdf.h - found -- Found JPEG: /usr/lib64/libjpeg.so -- Looking for Hopen in /usr/lib64/libmfhdf.so;/usr/lib64/libdf.so -- Looking for Hopen in /usr/lib64/libmfhdf.so;/usr/lib64/libdf.so - found -- Looking for sd_nccreate in /usr/lib64/libmfhdf.so;/usr/lib64/libdf.so -- Looking for sd_nccreate in /usr/lib64/libmfhdf.so;/usr/lib64/libdf.so - found -- Found LIBPROJ4: /usr/lib64/libproj.so -- Looking for proj_init in /usr/lib64/libproj.so -- Looking for proj_init in /usr/lib64/libproj.so - not found -- Looking for pj_init in /usr/lib64/libproj.so -- Looking for pj_init in /usr/lib64/libproj.so - found -- checking for module 'libps' -- found libps, version 0.4.5 -- Found LIBPS: ps -- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so -- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Looking for IceConnectionNumber in ICE -- Looking for IceConnectionNumber in ICE - found CMake Warning (dev) at testsuite/CMakeLists.txt:50 (get_target_property): Policy CMP0026 is not set: Disallow use of the LOCATION target property. Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy command to set the policy and suppress this warning. The LOCATION property should not be read from target "launchtest". Use the target name directly with add_custom_command, or use the generator expression $, as appropriate. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:796 (get_target_property): Policy CMP0026 is not set: Disallow use of the LOCATION target property. Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy command to set the policy and suppress this warning. The LOCATION property should not be read from target "gdl". Use the target name directly with add_custom_command, or use the generator expression $, as appropriate. This warning is for project developers. Use -Wno-dev to suppress it. -- Summary GDL - GNU DATA LANGUAGE [Standalone] System Linux-3.17.4-gentoo Files generated Unix Makefiles GDL output /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build/src//gdl Installation prefix /usr C++ compiler /usr/bin/mpicxx -- Options OpenMP support ON -fopenmp WxWidgets ON -L/usr/lib64;-pthread;-Wl,-O1;-Wl,--as-needed;-L/usr/lib64;-lwx_gtk2u_richtext-2.8;-lwx_gtk2u_aui-2.8;-lwx_gtk2u_xrc-2.8;-lwx_gtk2u_qa-2.8;-lwx_gtk2u_html-2.8;-lwx_gtk2u_adv-2.8;-lwx_gtk2u_core-2.8;-lwx_baseu_xml-2.8;-lwx_baseu_net-2.8;-lwx_baseu-2.8 ImageMagick OFF NetCDF ON netcdf HDF4 ON /usr/lib64/libmfhdf.so;/usr/lib64/libdf.so;z;/usr/lib64/libjpeg.so HDF5 ON /usr/lib64/libhdf5.so;/usr/lib64/libhdf5_hl.so;/usr/lib64/libhdf5.so;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so FFTW ON /usr/lib64/libfftw3.so;/usr/lib64/libfftw3f.so Libproj4 ON /usr/lib64/libproj.so MPICH OFF Python OFF UDUNITS-2 OFF EIGEN3 ON GRAPHICSMAGICK ON /usr/lib64/libGraphicsMagick.so;/usr/lib64/libGraphicsMagick++.so GRIB OFF GSHHS OFF pslib ON Xlib ON /usr/lib64/libSM.so;/usr/lib64/libICE.so;/usr/lib64/libX11.so;/usr/lib64/libXext.so -- Mandatory modules Plplot ON /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so Old Plplot OFF Readline ON /usr/lib64/libreadline.so;/usr/lib64/libhistory.so GSL ON /usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so Zlib ON /usr/lib64/libz.so Ncurses ON /usr/lib64/libncurses.so;/usr/lib64/libform.so -- <<< Gentoo configuration >>> Build type Gentoo Install path /usr Compiler flags: C -march=amdfam10 -O2 -pipe C++ -march=amdfam10 -O2 -pipe Linker flags: Executable -Wl,-O1 -Wl,--as-needed Module -Wl,-O1 -Wl,--as-needed Shared -Wl,-O1 -Wl,--as-needed -- Configuring done -- Generating done -- Build files have been written to: /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build * python2_7: running configuration -DPYTHON_MODULE=ON -DPYTHON=ON >>> Working in BUILD_DIR: "/var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build-python2_7" cmake --no-warn-unused-cli -C /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build-python2_7/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DMPICH=OFF -DBUNDLED_ANTLR=OFF -DX11=ON -Dfftw=ON -DFFTW=ON -DFftw=ON -DEIGEN3=ON -Dgrib=OFF -DGRIB=OFF -DGrib=OFF -Dgshhs=OFF -DGSHHS=OFF -DGshhs=OFF -Dhdf=ON -DHDF=ON -DHdf=ON -Dhdf5=ON -DHDF5=ON -DHdf5=ON -Dnetcdf=ON -DNETCDF=ON -DNetcdf=ON -Dopenmp=ON -DOPENMP=ON -DOpenmp=ON -DLIBPROJ4=ON -DPSLIB=ON -Dudunits=OFF -DUDUNITS=OFF -DUdunits=OFF -Dwxwidgets=ON -DWXWIDGETS=ON -DWxwidgets=ON -DGRAPHICSMAGICK=ON -DMAGICK=OFF -DPYTHON_MODULE=OFF -DPYTHON=OFF -DPYTHON_MODULE=ON -DPYTHON=ON -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_INSTALL_DO_STRIP=OFF -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build-python2_7/gentoo_rules.cmake -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build-python2_7/gentoo_toolchain.cmake /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4 Not searching for unused variables given on the command line. loading initial cache file /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build-python2_7/gentoo_common_config.cmake Re-run cmake no build system arguments CMake Warning (dev) in CMakeLists.txt: Syntax Warning in cmake code at /var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4/CMakeLists.txt:550:55 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 4.8.3 -- The CXX compiler identification is GNU 4.8.3 -- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/mpicxx -- Check for working CXX compiler: /usr/bin/mpicxx -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Found PkgConfig: /usr/bin/x86_64-pc-linux-gnu-pkg-config (found version "0.28") -- Looking for dlopen in dl -- Looking for dlopen in dl - found -- Looking for malloc_zone_statistics -- Looking for malloc_zone_statistics - not found -- Looking for sbrk -- Looking for sbrk - found -- Looking for mallinfo -- Looking for mallinfo - found -- Looking for malloc.h -- Looking for malloc.h - found -- Looking for malloc/malloc.h -- Looking for malloc/malloc.h - not found -- Looking for locale.h -- Looking for locale.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stdlib.h -- Looking for stdlib.h - found -- Looking for string.h -- Looking for string.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for ext/stdio_filebuf.h -- Looking for ext/stdio_filebuf.h - not found -- Looking for dlfcn.h -- Looking for dlfcn.h - found -- Looking for inttypes.h -- Looking for inttypes.h - found -- Looking for nexttoward in m -- Looking for nexttoward in m - found -- Looking for mpi.h -- Looking for mpi.h - found -- Looking for wsyncup in /usr/lib64/libcurses.so -- Looking for wsyncup in /usr/lib64/libcurses.so - found -- Looking for cbreak in /usr/lib64/libncurses.so -- Looking for cbreak in /usr/lib64/libncurses.so - found -- Looking for rl_get_screen_size in /usr/lib64/libreadline.so;/usr/lib64/libhistory.so -- Looking for rl_get_screen_size in /usr/lib64/libreadline.so;/usr/lib64/libhistory.so - found -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Found PLPLOT: /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for c_plslabelfunc in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for c_plslabelfunc in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so - found -- Performing Test HAVE_PLPLOT_WIDTH -- Performing Test HAVE_PLPLOT_WIDTH - Success -- Looking for plstrl in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for plstrl in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so - found -- Looking for c_pllegend in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for c_pllegend in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so - found -- Found GRAPHICSMAGICK: /usr/lib64/libGraphicsMagick.so;/usr/lib64/libGraphicsMagick++.so -- checking for module 'netcdf' -- found netcdf, version 4.3.2 -- Found NETCDF: netcdf -- Looking for C++ include netcdf.h -- Looking for C++ include netcdf.h - found -- Found JPEG: /usr/lib64/libjpeg.so -- Looking for Hopen in /usr/lib64/libmfhdf.so;/usr/lib64/libdf.so -- Looking for Hopen in /usr/lib64/libmfhdf.so;/usr/lib64/libdf.so - found -- Looking for sd_nccreate in /usr/lib64/libmfhdf.so;/usr/lib64/libdf.so -- Looking for sd_nccreate in /usr/lib64/libmfhdf.so;/usr/lib64/libdf.so - found -- Found LIBPROJ4: /usr/lib64/libproj.so -- Looking for proj_init in /usr/lib64/libproj.so -- Looking for proj_init in /usr/lib64/libproj.so - not found -- Looking for pj_init in /usr/lib64/libproj.so -- Looking for pj_init in /usr/lib64/libproj.so - found -- Could NOT find PythonLibs (missing: PYTHON_LIBRARIES PYTHON_INCLUDE_DIRS) (Required is at least version "2") -- Found PythonInterp: /var/tmp/portage/dev-lang/gdl-0.9.4/temp/python2.7/bin/python (found version "2.7.8") CMake Error at CMakeLists.txt:665 (message): Python is required but was not found. Use -DPYTHONDIR=DIR to specify the Python directory tree. Use -DPYTHONVERSION=VERSION to help searching for the right version. (suitable Debian/Ubuntu package: python-dev) (suitable Fedora package: python-devel) Use -DPYTHON=OFF to disable Python support. Use -DPYTHON_MODULE=OFF to disable Python module. -- Configuring incomplete, errors occurred! See also "/var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build-python2_7/CMakeFiles/CMakeOutput.log". See also "/var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build-python2_7/CMakeFiles/CMakeError.log". * ERROR: dev-lang/gdl-0.9.4::gentoo failed (configure phase): * cmake failed * * Call stack: * ebuild.sh, line 93: Called src_configure * environment, line 4166: Called python_foreach_impl 'configuration' '-DPYTHON_MODULE=ON' '-DPYTHON=ON' * environment, line 3711: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'configuration' '-DPYTHON_MODULE=ON' '-DPYTHON=ON' * environment, line 2780: Called _multibuild_run '_python_multibuild_wrapper' 'configuration' '-DPYTHON_MODULE=ON' '-DPYTHON=ON' * environment, line 2778: Called _python_multibuild_wrapper 'configuration' '-DPYTHON_MODULE=ON' '-DPYTHON=ON' * environment, line 911: Called configuration '-DPYTHON_MODULE=ON' '-DPYTHON=ON' * environment, line 4163: Called cmake-utils_src_configure * environment, line 1228: Called _execute_optionally 'src_configure' * environment, line 446: Called enable_cmake-utils_src_configure * environment, line 1544: Called die * The specific snippet of code: * "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; * * If you need support, post the output of `emerge --info '=dev-lang/gdl-0.9.4::gentoo'`, * the complete build log and the output of `emerge -pqv '=dev-lang/gdl-0.9.4::gentoo'`. * The complete build log is located at '/var/tmp/portage/dev-lang/gdl-0.9.4/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-lang/gdl-0.9.4/temp/environment'. * Working directory: '/var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4_build-python2_7' * S: '/var/tmp/portage/dev-lang/gdl-0.9.4/work/gdl-0.9.4'