* Package: dev-python/rpy-2.3.9  * Repository: gentoo  * Maintainer: python@gentoo.org sci@gentoo.org  * USE: amd64 elibc_glibc kernel_linux python_targets_python2_7 python_targets_python3_3 userland_GNU  * FEATURES: preserve-libs sandbox userpriv usersandbox >>> Unpacking source... >>> Unpacking rpy2-2.3.9.tar.gz to /var/tmp/portage/dev-python/rpy-2.3.9/work >>> Source unpacked in /var/tmp/portage/dev-python/rpy-2.3.9/work >>> Preparing source in /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9 ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9 ... >>> Source configured. >>> Compiling source in /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9 ... * python3_3: running distutils-r1_run_phase distutils-r1_python_compile /usr/bin/python3.3 setup.py build warning: no previously-included files matching '*patch*' found anywhere in distribution warning: no previously-included files matching '*diff*' found anywhere in distribution warning: no previously-included files matching '.hg' found anywhere in distribution no previously-included directories found matching 'dist' Using 2to3 to translate Python2-only idioms into Python3 code. Please wait... done. running build running build_py creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2 copying build/python3_rpy/rpy/tests.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2 copying build/python3_rpy/rpy/tests_rpy_classic.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2 copying build/python3_rpy/rpy/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2 copying build/python3_rpy/rpy/rpy_classic.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2 creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rlike copying build/python3_rpy/rpy/rlike/container.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rlike copying build/python3_rpy/rpy/rlike/functional.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rlike copying build/python3_rpy/rpy/rlike/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rlike copying build/python3_rpy/rpy/rlike/indexing.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rlike creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rlike/tests copying build/python3_rpy/rpy/rlike/tests/test_container.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rlike/tests copying build/python3_rpy/rpy/rlike/tests/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rlike/tests copying build/python3_rpy/rpy/rlike/tests/test_functional.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rlike/tests copying build/python3_rpy/rpy/rlike/tests/test_indexing.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rlike/tests creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface copying build/python3_rpy/rpy/rinterface/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface/tests copying build/python3_rpy/rpy/rinterface/tests/test_SexpEnvironment.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface/tests copying build/python3_rpy/rpy/rinterface/tests/test_Sexp.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface/tests copying build/python3_rpy/rpy/rinterface/tests/test_Device.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface/tests copying build/python3_rpy/rpy/rinterface/tests/test_SexpClosure.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface/tests copying build/python3_rpy/rpy/rinterface/tests/test_SexpVectorNumeric.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface/tests copying build/python3_rpy/rpy/rinterface/tests/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface/tests copying build/python3_rpy/rpy/rinterface/tests/test_SexpVector.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface/tests copying build/python3_rpy/rpy/rinterface/tests/test_EmbeddedR.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface/tests copying build/python3_rpy/rpy/rinterface/tests/test_SexpExtPtr.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/rinterface/tests creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/conversion.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/packages.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/numpy2ri.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/help.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/constants.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/vectors.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/functions.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/language.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/robject.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/environments.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/methods.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects copying build/python3_rpy/rpy/robjects/pandas2ri.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testVector.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testRObject.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testPandasConversions.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testArray.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testRobjects.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testNumpyConversions.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testFormula.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testDataFrame.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testMethods.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testLanguage.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testPackages.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testHelp.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testFunction.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests copying build/python3_rpy/rpy/robjects/tests/testEnvironment.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/tests creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/lib copying build/python3_rpy/rpy/robjects/lib/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/lib copying build/python3_rpy/rpy/robjects/lib/ggplot2.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/lib copying build/python3_rpy/rpy/robjects/lib/grid.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/lib creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/lib/tests copying build/python3_rpy/rpy/robjects/lib/tests/test_ggplot2.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/lib/tests copying build/python3_rpy/rpy/robjects/lib/tests/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/robjects/lib/tests creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/interactive copying build/python3_rpy/rpy/interactive/packages.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/interactive copying build/python3_rpy/rpy/interactive/process_revents.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/interactive copying build/python3_rpy/rpy/interactive/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/interactive copying build/python3_rpy/rpy/interactive/ipython.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/interactive creating /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/interactive/tests copying build/python3_rpy/rpy/interactive/tests/__init__.py -> /var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9-python3_3/lib/rpy2/interactive/tests warning: build_py: byte-compiling is disabled, skipping. running build_ext "/usr/lib64/R/bin/R" CMD config --ldflags Invalid substring -fopenmp in string -Wl,--export-dynamic -fopenmp -Wl,-O1 -Wl,--as-needed -L/usr/lib64/R/lib -lR -lpcre -llzma -lbz2 -lz -lrt -ldl -lm Problem while running `"/usr/lib64/R/bin/R" CMD config --ldflags` * ERROR: dev-python/rpy-2.3.9::gentoo failed (compile phase): * (no error message) * * Call stack: * ebuild.sh, line 93: Called src_compile * environment, line 3353: Called distutils-r1_src_compile * environment, line 1054: Called _distutils-r1_run_foreach_impl 'distutils-r1_python_compile' * environment, line 263: Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'distutils-r1_python_compile' * environment, line 3212: Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'distutils-r1_python_compile' * environment, line 2374: Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'distutils-r1_python_compile' * environment, line 2317: Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'distutils-r1_python_compile' * environment, line 2315: Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'distutils-r1_python_compile' * environment, line 2365: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'distutils-r1_python_compile' * environment, line 675: Called distutils-r1_run_phase 'distutils-r1_python_compile' * environment, line 1043: Called distutils-r1_python_compile * environment, line 926: Called esetup.py 'build' * environment, line 1493: Called die * The specific snippet of code: * "${@}" || die * * If you need support, post the output of `emerge --info '=dev-python/rpy-2.3.9::gentoo'`, * the complete build log and the output of `emerge -pqv '=dev-python/rpy-2.3.9::gentoo'`. * The complete build log is located at '/var/tmp/portage/dev-python/rpy-2.3.9/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-python/rpy-2.3.9/temp/environment'. * Working directory: '/var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9' * S: '/var/tmp/portage/dev-python/rpy-2.3.9/work/rpy2-2.3.9'