* Package: sci-misc/nco-4.4.2  * Repository: gentoo  * Maintainer: sci@gentoo.org  * USE: amd64 dap doc elibc_glibc gsl kernel_linux ncap2 udunits userland_GNU  * FEATURES: preserve-libs sandbox userpriv usersandbox >>> Unpacking source... >>> Unpacking nco-4.4.2.tar.gz to /var/tmp/portage/sci-misc/nco-4.4.2/work >>> Source unpacked in /var/tmp/portage/sci-misc/nco-4.4.2/work >>> Preparing source in /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2 ... * Running elibtoolize in: nco-4.4.2/ * Applying target-nm/2.4.2 patch ... * Running elibtoolize in: nco-4.4.2/autobld/ * Applying portage/1.2.0 patch ... * Applying sed/1.5.6 patch ... * Applying as-needed/2.4.2 patch ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2 ... >>> Working in BUILD_DIR: "/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build" * econf: updating nco-4.4.2/autobld/config.guess with /usr/share/gnuconfig/config.guess * econf: updating nco-4.4.2/autobld/config.sub with /usr/share/gnuconfig/config.sub /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --disable-silent-rules --disable-dependency-tracking --docdir=/usr/share/doc/nco-4.4.2 --enable-shared --disable-static --disable-udunits --enable-dap-netcdf --enable-gsl --enable-ncap2 --enable-udunits2 --enable-netcdf4 configure: loading site script /usr/share/config.site checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for a BSD-compatible install... /usr/lib64/portage/bin/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of x86_64-pc-linux-gnu-gcc... none checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes checking dependency style of x86_64-pc-linux-gnu-g++... none checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E checking for x86_64-pc-linux-gnu-gcc option to accept ISO C99... -std=gnu99 checking for x86_64-pc-linux-gnu-gcc -std=gnu99 option to accept ISO Standard C... (cached) -std=gnu99 checking for flex... flex checking lex output file root... lex.yy checking lex library... -lfl checking whether yytext is a pointer... yes checking for bison... bison -y checking whether ln -s works... yes checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for fgrep... /bin/grep -F checking for ld used by x86_64-pc-linux-gnu-gcc -std=gnu99... /usr/x86_64-pc-linux-gnu/bin/ld checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-pc-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc -std=gnu99 object... ok checking for sysroot... no checking for x86_64-pc-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-pc-linux-gnu-gcc -std=gnu99 supports -fno-rtti -fno-exceptions... no checking for x86_64-pc-linux-gnu-gcc -std=gnu99 option to produce PIC... -fPIC -DPIC checking if x86_64-pc-linux-gnu-gcc -std=gnu99 PIC flag -fPIC -DPIC works... yes checking if x86_64-pc-linux-gnu-gcc -std=gnu99 static flag -static works... yes checking if x86_64-pc-linux-gnu-gcc -std=gnu99 supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-gcc -std=gnu99 supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-gcc -std=gnu99 linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for working memcmp... yes checking whether lstat correctly handles trailing slash... yes checking whether stat accepts an empty string... no checking for working strtod... yes checking for canonicalize_file_name... yes checking for floor... no checking for gethostname... yes checking for getpagesize... yes checking for getrusage... yes checking for memchr... yes checking for memmove... yes checking for memset... yes checking for mkstemp... yes checking for pow... no checking for readlink... yes checking for realpath... yes checking for regcomp... yes checking for setlocale... yes checking for sqrt... no checking for strchr... yes checking for strerror... yes checking for strpbrk... yes checking for strrchr... yes checking for strstr... yes checking for strtol... yes checking for ANSI C header files... (cached) yes checking getopt.h usability... yes checking getopt.h presence... yes checking for getopt.h... yes checking libintl.h usability... yes checking libintl.h presence... yes checking for libintl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking cstdlib usability... yes checking cstdlib presence... yes checking for cstdlib... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for pid_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking for ptrdiff_t... yes checking size of int*... 8 checking whether C++ compiler implements namespaces... yes checking whether C++ compiler has working valarray... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no ################################# # Test for netCDF # ################################ checking for /opt/local/include/netcdf.h... no checking for /opt/local/lib/libnetcdf.a... no checking for /sopt/netcdf/netcdf411-gcc-serial/include/netcdf.h... no checking for /sopt/netcdf/netcdf411-gcc-serial/lib/libnetcdf.a... no checking netcdf.h usability... yes checking netcdf.h presence... yes checking for netcdf.h... yes checking for nc_open in -lnetcdf... yes ################################# # Test for netCDF4 support # ################################# checking whether NC_CHUNKED is declared... yes configure: netcdf.h contains netCDF4 definitions checking for nc_def_var_chunking in -lnetcdf... yes configure: Good news: Simple program compiles and links to netCDF4 library checking for x86_64-pc-linux-gnu-gcc -std=gnu99 option to support OpenMP... -fopenmp Beginning generic tests for DAP support Testing for DAP-netCDF support (is DAP in libnetcdf.a?)... checking for nc__opendap in -lnetcdf... yes configure: DAP support enabled checking for getopt_long... yes checking for _g95_ac_array in -lf95... no checking for sin in -lm... yes checking for sinf in -lsunmath... no checking for gettext in -lintl... no checking for res_init in -lresolv... no checking for main in -lsocket... no checking for main in -lthread... no checking for nco_open in -lnco... no checking for nc_inq_format... yes checking for getopt... yes checking for getopt_long... (cached) yes checking for atan2... yes checking for acosf... yes checking for asinf... yes checking for atanf... yes checking for atan2f... yes checking for cosf... yes checking for expf... yes checking for fabsf... yes checking for fmodf... yes checking for log10f... yes checking for logf... yes checking for powf... yes checking for sinf... yes checking for sqrtf... yes checking for tanf... yes checking for erff... yes checking for erfcf... yes checking for gammaf... yes checking for acoshf... yes checking for asinhf... yes checking for atanhf... yes checking for coshf... yes checking for sinhf... yes checking for tanhf... yes checking for ceilf... yes checking for floorf... yes checking for nearbyint... yes checking for rint... yes checking for round... yes checking for trunc... yes checking for nearbyintf... yes checking for rintf... yes checking for roundf... yes checking for truncf... yes checking for getopt_long... (cached) yes checking for strdup... yes checking for strcasecmp... yes checking for strcasestr... yes ########################################################## # Sorting out MacOSX build parameters # ########################################################## ################################# # Testing for ANTLR support # ################################# checking for runantlr... no checking for antlr... antlr configure: antlr library was found ######################################## # Testing for GSL support # ######################################## configure: These GSL library and header tests must succeed for GSL support: checking for gsl_sf_gamma_inc in -lgsl... yes checking for /usr/include/gsl/gsl_sf_gamma.h... yes configure: GSL support enabled checking regex.h usability... yes checking regex.h presence... yes checking for regex.h... yes checking for sys/types.h... (cached) yes checking for regexec... yes checking for regcomp... (cached) yes checking for regfree... yes ######################################## # Testing for UDUNITS support # ######################################## checking for XML_ParserCreate in -lexpat... yes checking for /usr/include/udunits2/udunits2.h... no checking for /usr/include/udunits2.h... yes checking for /usr/lib/x86_64-linux-gnu/libudunits2.a... no checking for /usr/lib/i386-linux-gnu/libudunits2.a... no checking for /opt/local/include/udunits2/udunits2.h... no checking for /opt/local/lib/libudunits2.a... no checking for /usr/share/udunits/udunits2.xml... yes configure: NB: Following tests of UDUnits2 library and header must succeed for UDUnits2 support: checking for ut_read_xml in -ludunits2... yes checking udunits2.h usability... yes checking udunits2.h presence... yes checking for udunits2.h... yes configure: UDUnits2 support enabled checking for ncgen... /usr/bin/ncgen configure: Creating sample netCDF data files for self-tests can't open file data/in.cdl for reading: No such file or directory can't open file data/in_grp.cdl for reading: No such file or directory can't open file data/in_grp_1.cdl for reading: No such file or directory can't open file data/in_grp_2.cdl for reading: No such file or directory can't open file data/in_grp_3.cdl for reading: No such file or directory can't open file data/in_1.cdl for reading: No such file or directory can't open file data/in_2.cdl for reading: No such file or directory can't open file data/cmip5.cdl for reading: No such file or directory can't open file data/obs.cdl for reading: No such file or directory ln: failed to create symbolic link 'data/85.nc': No such file or directory ln: failed to create symbolic link 'data/86.nc': No such file or directory ln: failed to create symbolic link 'data/87.nc': No such file or directory ln: failed to create symbolic link 'data/88.nc': No such file or directory ln: failed to create symbolic link 'data/89.nc': No such file or directory ln: failed to create symbolic link 'data/h0001.nc': No such file or directory ln: failed to create symbolic link 'data/h0002.nc': No such file or directory ln: failed to create symbolic link 'data/h0003.nc': No such file or directory ln: failed to create symbolic link 'src/nco_c++/in.nc': No such file or directory ############################### # Require Shared Libs? # ############################### checking for makeinfo... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating data/Makefile config.status: creating src/Makefile config.status: creating src/nco/Makefile config.status: creating man/Makefile config.status: creating src/nco_c++/Makefile config.status: creating src/nco++/Makefile config.status: creating doc/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands Configuration Parameters: AR_FLAGS............. cru CC................... x86_64-pc-linux-gnu-gcc -std=gnu99 CFLAGS............... -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE CPP.................. x86_64-pc-linux-gnu-gcc -E CPPFLAGS............. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include CXX.................. x86_64-pc-linux-gnu-g++ CXXFLAGS............. -mtune=generic -O2 -pipe OPENMP_CFLAGS........ -fopenmp ENABLE_DAP_NETCDF.... yes ENABLE_DAP........... yes ENABLE_GSL........... yes HAVE_NETCDF4_H....... yes ENABLE_NETCDF4....... yes NETCDF4_ROOT......... ENABLE_UDUNITS....... no ENABLE_UDUNITS2...... yes GSL_ROOT............. /usr HAVE_ANTLR........... antlr HAVE_MAKEINFO........ yes HOST................. host................. x86_64-pc-linux-gnu HOSTNAME............. crozon LDFLAGS.............. -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed LIBS................. -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 install prefix ...... /usr ******************************************************************* Configuration complete. You are now ready to run 'make'. Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax). If the build fails, please examine the file 'configure.eg' in the top-level NCO directory. It contains examples known to build NCO for various platforms and compilers. ******************************************************************* >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2 ... >>> Working in BUILD_DIR: "/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build" make -j3 make all-recursive make[1]: Entering directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build' Making all in data make[2]: Entering directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build/data' /usr/bin/ncgen -o big.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/big.cdl /usr/bin/ncgen -o in.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/in.cdl /usr/bin/ncgen -o in_rec_zero.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/in_rec_zero.cdl /usr/bin/ncgen -k netCDF-4 -o in_grp.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/in_grp.cdl /usr/bin/ncgen -k netCDF-4 -o in_grp_1.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/in_grp_1.cdl /usr/bin/ncgen -k netCDF-4 -o in_grp_2.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/in_grp_2.cdl /usr/bin/ncgen -k netCDF-4 -o in_grp_3.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/in_grp_3.cdl /usr/bin/ncgen -k netCDF-4 -o cmip5.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/cmip5.cdl /usr/bin/ncgen -k netCDF-4 -o obs.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/obs.cdl /usr/bin/ncgen -k netCDF-4 -o mdl.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/mdl.cdl /usr/bin/ncgen -k netCDF-4 -o mdl2.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/mdl2.cdl /usr/bin/ncgen -k netCDF-4 -o hdn.nc /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/data/hdn.cdl make[2]: Leaving directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build/data' Making all in src make[2]: Entering directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build/src' Making all in nco make[3]: Entering directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_att_utl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_att_utl.c /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_aux.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_aux.c /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_bnr.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_bnr.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_att_utl.c -fPIC -DPIC -o .libs/nco_att_utl.o libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_bnr.c -fPIC -DPIC -o .libs/nco_bnr.o libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_aux.c -fPIC -DPIC -o .libs/nco_aux.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cln_utl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cln_utl.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cln_utl.c -fPIC -DPIC -o .libs/nco_cln_utl.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnf_dmn.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cnf_dmn.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cnf_dmn.c -fPIC -DPIC -o .libs/nco_cnf_dmn.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnf_typ.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cnf_typ.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cnf_typ.c -fPIC -DPIC -o .libs/nco_cnf_typ.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnk.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cnk.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cnk.c -fPIC -DPIC -o .libs/nco_cnk.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnv_arm.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cnv_arm.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cnv_arm.c -fPIC -DPIC -o .libs/nco_cnv_arm.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnv_csm.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cnv_csm.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_cnv_csm.c -fPIC -DPIC -o .libs/nco_cnv_csm.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_ctl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_ctl.c /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_dbg.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_dbg.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_ctl.c -fPIC -DPIC -o .libs/nco_ctl.o libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_dbg.c -fPIC -DPIC -o .libs/nco_dbg.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_dmn_utl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_dmn_utl.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_dmn_utl.c -fPIC -DPIC -o .libs/nco_dmn_utl.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_fl_utl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_fl_utl.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_fl_utl.c -fPIC -DPIC -o .libs/nco_fl_utl.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_grp_utl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_grp_utl.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_grp_utl.c -fPIC -DPIC -o .libs/nco_grp_utl.o /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_fl_utl.c: In function 'nco_create_mode_prs': /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_fl_utl.c:58:3: warning: implicit declaration of function 'strcasestr' [-Wimplicit-function-declaration] /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_grp_trv.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_grp_trv.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_grp_trv.c -fPIC -DPIC -o .libs/nco_grp_trv.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_lmt.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_lmt.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_lmt.c -fPIC -DPIC -o .libs/nco_lmt.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_lst_utl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_lst_utl.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_lst_utl.c -fPIC -DPIC -o .libs/nco_lst_utl.o /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_lst_utl.c: In function 'nco_fmt_sng_printf_subst': /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_lst_utl.c:37:23: warning: unknown escape sequence: '\.' [enabled by default] /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_md5.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_md5.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_md5.c -fPIC -DPIC -o .libs/nco_md5.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mmr.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_mmr.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_mmr.c -fPIC -DPIC -o .libs/nco_mmr.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_msa.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_msa.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_msa.c -fPIC -DPIC -o .libs/nco_msa.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mss_val.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_mss_val.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_mss_val.c -fPIC -DPIC -o .libs/nco_mss_val.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_netcdf.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_netcdf.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_netcdf.c -fPIC -DPIC -o .libs/nco_netcdf.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_omp.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_omp.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_omp.c -fPIC -DPIC -o .libs/nco_omp.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_pck.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_pck.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_pck.c -fPIC -DPIC -o .libs/nco_pck.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_prn.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_prn.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_prn.c -fPIC -DPIC -o .libs/nco_prn.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rec_var.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_rec_var.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_rec_var.c -fPIC -DPIC -o .libs/nco_rec_var.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rth_flt.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_rth_flt.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_rth_flt.c -fPIC -DPIC -o .libs/nco_rth_flt.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rth_utl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_rth_utl.c /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_scl_utl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_scl_utl.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_rth_utl.c -fPIC -DPIC -o .libs/nco_rth_utl.o libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_scl_utl.c -fPIC -DPIC -o .libs/nco_scl_utl.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_scm.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_scm.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_scm.c -fPIC -DPIC -o .libs/nco_scm.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_sng_utl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_sng_utl.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_sng_utl.c -fPIC -DPIC -o .libs/nco_sng_utl.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_srm.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_srm.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_srm.c -fPIC -DPIC -o .libs/nco_srm.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_avg.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_var_avg.c /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_lst.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_var_lst.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_var_lst.c -fPIC -DPIC -o .libs/nco_var_lst.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_rth.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_var_rth.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_var_rth.c -fPIC -DPIC -o .libs/nco_var_rth.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_scv.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_var_scv.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_utl.lo /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_var_utl.c libtool: compile: x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/nco_var_utl.c -fPIC -DPIC -o .libs/nco_var_utl.o x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncap_utl.c x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncap.c test -f ncap_yacc.c || /bin/sh /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/autobld/ylwrap /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncap_yacc.y y.tab.c ncap_yacc.c y.tab.h `echo ncap_yacc.c | sed -e s/cc$/hh/ -e s/cpp$/hpp/ -e s/cxx$/hxx/ -e s/c++$/h++/ -e s/c$/h/` y.output ncap_yacc.output -- bison -y -d --name-prefix=nco_yy test -f ncap_lex.c || /bin/sh /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/autobld/ylwrap /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex -Pnco_yy x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncatted.c updating ncap_yacc.h x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncbo.c x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncecat.c x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncflint.c x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncks.c x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncpdq.c x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncra.c x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncrename.c x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco/ncwa.c /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -release 4.4.2 -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o libnco.la -rpath /usr/lib64 nco_att_utl.lo nco_aux.lo nco_bnr.lo nco_cln_utl.lo nco_cnf_dmn.lo nco_cnf_typ.lo nco_cnk.lo nco_cnv_arm.lo nco_cnv_csm.lo nco_ctl.lo nco_dbg.lo nco_dmn_utl.lo nco_fl_utl.lo nco_grp_utl.lo nco_grp_trv.lo nco_lmt.lo nco_lst_utl.lo nco_md5.lo nco_mmr.lo nco_msa.lo nco_mss_val.lo nco_netcdf.lo nco_omp.lo nco_pck.lo nco_prn.lo nco_rec_var.lo nco_rth_flt.lo nco_rth_utl.lo nco_scl_utl.lo nco_scm.lo nco_sng_utl.lo nco_srm.lo nco_var_avg.lo nco_var_lst.lo nco_var_rth.lo nco_var_scv.lo nco_var_utl.lo -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 libtool: link: x86_64-pc-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/crtbeginS.o .libs/nco_att_utl.o .libs/nco_aux.o .libs/nco_bnr.o .libs/nco_cln_utl.o .libs/nco_cnf_dmn.o .libs/nco_cnf_typ.o .libs/nco_cnk.o .libs/nco_cnv_arm.o .libs/nco_cnv_csm.o .libs/nco_ctl.o .libs/nco_dbg.o .libs/nco_dmn_utl.o .libs/nco_fl_utl.o .libs/nco_grp_utl.o .libs/nco_grp_trv.o .libs/nco_lmt.o .libs/nco_lst_utl.o .libs/nco_md5.o .libs/nco_mmr.o .libs/nco_msa.o .libs/nco_mss_val.o .libs/nco_netcdf.o .libs/nco_omp.o .libs/nco_pck.o .libs/nco_prn.o .libs/nco_rec_var.o .libs/nco_rth_flt.o .libs/nco_rth_utl.o .libs/nco_scl_utl.o .libs/nco_scm.o .libs/nco_sng_utl.o .libs/nco_srm.o .libs/nco_var_avg.o .libs/nco_var_lst.o .libs/nco_var_rth.o .libs/nco_var_scv.o .libs/nco_var_utl.o -L/usr/lib -Wl,--as-needed -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so /usr/lib64/libudunits2.so -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../../../lib64/crtn.o -mtune=generic -O2 -Wl,-O1 -Wl,-soname -Wl,libnco-4.4.2.so -o .libs/libnco-4.4.2.so libtool: link: (cd ".libs" && rm -f "libnco.so" && ln -s "libnco-4.4.2.so" "libnco.so") libtool: link: ( cd ".libs" && rm -f "libnco.la" && ln -s "../libnco.la" "libnco.la" ) x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c ncap_yacc.c x86_64-pc-linux-gnu-gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco -I../.. -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c ncap_lex.c /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o ncatted ncatted.o libnco.la -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 libtool: link: x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-O1 -o .libs/ncatted ncatted.o -L/usr/lib -Wl,--as-needed ./.libs/libnco.so -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so -lm /usr/lib64/libudunits2.so /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o ncbo ncbo.o libnco.la -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o ncecat ncecat.o libnco.la -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 libtool: link: x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-O1 -o .libs/ncbo ncbo.o -L/usr/lib -Wl,--as-needed ./.libs/libnco.so -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so -lm /usr/lib64/libudunits2.so libtool: link: x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-O1 -o .libs/ncecat ncecat.o -L/usr/lib -Wl,--as-needed ./.libs/libnco.so -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so -lm /usr/lib64/libudunits2.so /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o ncflint ncflint.o libnco.la -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o ncks ncks.o libnco.la -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o ncpdq ncpdq.o libnco.la -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 libtool: link: x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-O1 -o .libs/ncflint ncflint.o -L/usr/lib -Wl,--as-needed ./.libs/libnco.so -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so -lm /usr/lib64/libudunits2.so libtool: link: x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-O1 -o .libs/ncks ncks.o -L/usr/lib -Wl,--as-needed ./.libs/libnco.so -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so -lm /usr/lib64/libudunits2.so libtool: link: x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-O1 -o .libs/ncpdq ncpdq.o -L/usr/lib -Wl,--as-needed ./.libs/libnco.so -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so -lm /usr/lib64/libudunits2.so /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o ncra ncra.o libnco.la -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o ncrename ncrename.o libnco.la -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o ncwa ncwa.o ncap_utl.o ncap_lex.o ncap_yacc.o libnco.la -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 libtool: link: x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-O1 -o .libs/ncra ncra.o -L/usr/lib -Wl,--as-needed ./.libs/libnco.so -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so -lm /usr/lib64/libudunits2.so libtool: link: x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-O1 -o .libs/ncwa ncwa.o ncap_utl.o ncap_lex.o ncap_yacc.o -L/usr/lib -Wl,--as-needed ./.libs/libnco.so -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so -lm /usr/lib64/libudunits2.so libtool: link: x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-O1 -o .libs/ncrename ncrename.o -L/usr/lib -Wl,--as-needed ./.libs/libnco.so -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so -lm /usr/lib64/libudunits2.so /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o ncap ncap_utl.o ncap.o ncap_yacc.o ncap_lex.o libnco.la -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 libtool: link: x86_64-pc-linux-gnu-gcc -std=gnu99 -mtune=generic -O2 -pipe -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-O1 -o .libs/ncap ncap_utl.o ncap.o ncap_yacc.o ncap_lex.o -L/usr/lib -Wl,--as-needed ./.libs/libnco.so -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so -lm /usr/lib64/libudunits2.so make[3]: Leaving directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build/src/nco' Making all in nco_c++ make[3]: Entering directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c -o libnco_c___la-nco_att.lo `test -f 'nco_att.cc' || echo '/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/'`nco_att.cc /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c -o libnco_c___la-nco_dmn.lo `test -f 'nco_dmn.cc' || echo '/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/'`nco_dmn.cc /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c -o libnco_c___la-nco_fl.lo `test -f 'nco_fl.cc' || echo '/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/'`nco_fl.cc libtool: compile: x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/nco_att.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_att.o libtool: compile: x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/nco_fl.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_fl.o libtool: compile: x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/nco_dmn.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_dmn.o /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c -o libnco_c___la-nco_hgh.lo `test -f 'nco_hgh.cc' || echo '/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/'`nco_hgh.cc libtool: compile: x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/nco_hgh.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_hgh.o /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c -o libnco_c___la-nco_utl.lo `test -f 'nco_utl.cc' || echo '/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/'`nco_utl.cc /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c -o libnco_c___la-nco_var.lo `test -f 'nco_var.cc' || echo '/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/'`nco_var.cc libtool: compile: x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/nco_utl.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_utl.o libtool: compile: x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++ -I../.. -DABORT_ON_ERROR -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco_c++/nco_var.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_var.o ln -f -s ../../data/in.nc in.nc /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -mtune=generic -O2 -pipe -release 4.4.2 -L/usr/lib -lnetcdf -Wl,-O1 -Wl,--as-needed -o libnco_c++.la -rpath /usr/lib64 libnco_c___la-nco_att.lo libnco_c___la-nco_dmn.lo libnco_c___la-nco_fl.lo libnco_c___la-nco_hgh.lo libnco_c___la-nco_utl.lo libnco_c___la-nco_var.lo -ludunits2 -lexpat -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm -ludunits2 libtool: link: x86_64-pc-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/crtbeginS.o .libs/libnco_c___la-nco_att.o .libs/libnco_c___la-nco_dmn.o .libs/libnco_c___la-nco_fl.o .libs/libnco_c___la-nco_hgh.o .libs/libnco_c___la-nco_utl.o .libs/libnco_c___la-nco_var.o -L/usr/lib -Wl,--as-needed -lexpat -lnetcdf -lcurl -L/usr/lib64 /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so /usr/lib64/libudunits2.so -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../../../lib64/crtn.o -mtune=generic -O2 -Wl,-O1 -Wl,-soname -Wl,libnco_c++-4.4.2.so -o .libs/libnco_c++-4.4.2.so libtool: link: (cd ".libs" && rm -f "libnco_c++.so" && ln -s "libnco_c++-4.4.2.so" "libnco_c++.so") libtool: link: ( cd ".libs" && rm -f "libnco_c++.la" && ln -s "../libnco_c++.la" "libnco_c++.la" ) make[3]: Leaving directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build/src/nco_c++' Making all in nco++ make[3]: Entering directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build/src/nco++' x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++ -I../.. -I./ -I../nco -I/usr/include -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c -o Invoke.o /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/Invoke.cc x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++ -I../.. -I./ -I../nco -I/usr/include -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c -o ncap2.o /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/ncap2.cc x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++ -I../.. -I./ -I../nco -I/usr/include -I/usr/include -DHAVE_NETCDF4_H -I/usr/include -I/usr/include -mtune=generic -O2 -pipe -c -o ncap2_utl.o /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/ncap2_utl.cc In file included from /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/ncap2_utl.cc:9:0: /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/ncap2_utl.hh:46:59: fatal error: nco_netcdf.h: No such file or directory compilation terminated. make[3]: *** [ncap2_utl.o] Error 1 make[3]: *** Waiting for unfinished jobs.... In file included from /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/vtl_cls.hh:11:0, from /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/fmc_cls.hh:12, from /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/libnco++.hh:21, from /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/ncap2.cc:83: /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/ncap2_utl.hh:46:59: fatal error: nco_netcdf.h: No such file or directory compilation terminated. make[3]: *** [ncap2.o] Error 1 In file included from /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/vtl_cls.hh:11:0, from /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/fmc_cls.hh:12, from /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/libnco++.hh:21, from /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/Invoke.cc:13: /var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2/src/nco++/ncap2_utl.hh:46:59: fatal error: nco_netcdf.h: No such file or directory compilation terminated. make[3]: *** [Invoke.o] Error 1 make[3]: Leaving directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build/src/nco++' make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build/src' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build' make: *** [all] Error 2 * ERROR: sci-misc/nco-4.4.2::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=sci-misc/nco-4.4.2::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-misc/nco-4.4.2::gentoo'`. * The complete build log is located at '/var/tmp/portage/sci-misc/nco-4.4.2/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-misc/nco-4.4.2/temp/environment'. * Working directory: '/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2_build' * S: '/var/tmp/portage/sci-misc/nco-4.4.2/work/nco-4.4.2'