* Package: dev-lang/gdl-0.9.3  * Repository: gentoo  * Maintainer: sci@gentoo.org  * USE: amd64 elibc_glibc fftw hdf hdf5 imagemagick kernel_linux multilib netcdf openmp postscript proj python userland_GNU wxwidgets  * FEATURES: sandbox >>> Unpacking source... >>> Unpacking gdl-0.9.3.tar.gz to /var/tmp/portage/dev-lang/gdl-0.9.3/work >>> Source unpacked in /var/tmp/portage/dev-lang/gdl-0.9.3/work >>> Preparing source in /var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3 ... * Applying 0.9.2-antlr.patch ...  [ ok ] * Applying 0.9.2-proj4.patch ...  [ ok ] * Applying 0.9.2-include.patch ...  [ ok ] * Applying 0.9.2-tests.patch ...  [ ok ] * Applying 0.9.2-semaphore.patch ...  [ ok ] * Applying 0.9.3-sstream.patch ...  [ ok ] * Regenerate grammar ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 >>> Source prepared. >>> Configuring source in /var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3 ... >>> Working in BUILD_DIR: "/var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3_build" cmake --no-warn-unused-cli -C /var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DMPICH=OFF -DBUNDLED_ANTLR=OFF -DX11=ON -Dfftw=ON -DFFTW=ON -DFftw=ON -Dgrib=OFF -DGRIB=OFF -DGrib=OFF -Dgshhs=OFF -DGSHHS=OFF -DGshhs=OFF -Dhdf=ON -DHDF=ON -DHdf=ON -Dhdf5=ON -DHDF5=ON -DHdf5=ON -DMAGICK=ON -Dnetcdf=ON -DNETCDF=ON -DNetcdf=ON -Dopenmp=ON -DOPENMP=ON -DOpenmp=ON -DLIBPROJ4=ON -DPSLIB=ON -Dudunits=OFF -DUDUNITS=OFF -DUdunits=OFF -Dwxwidgets=ON -DWXWIDGETS=ON -DWxwidgets=ON -DPYTHON_MODULE=OFF -DPYTHON=OFF -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_INSTALL_DO_STRIP=OFF -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3_build/gentoo_rules.cmake /var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3 Not searching for unused variables given on the command line. loading initial cache file /var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3_build/gentoo_common_config.cmake Re-run cmake no build system arguments -- The C compiler identification is GNU 4.6.3 -- The CXX compiler identification is GNU 4.6.3 -- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/mpicxx -- Check for working CXX compiler: /usr/bin/mpicxx -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") -- Looking for dlopen in dl -- Looking for dlopen in dl - found -- Looking for malloc_zone_statistics -- Looking for malloc_zone_statistics - not found -- Looking for sbrk -- Looking for sbrk - found -- Looking for mallinfo -- Looking for mallinfo - found -- Looking for malloc.h -- Looking for malloc.h - found -- Looking for malloc/malloc.h -- Looking for malloc/malloc.h - not found -- Looking for locale.h -- Looking for locale.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stdlib.h -- Looking for stdlib.h - found -- Looking for string.h -- Looking for string.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for ext/stdio_filebuf.h -- Looking for ext/stdio_filebuf.h - not found -- Looking for dlfcn.h -- Looking for dlfcn.h - found -- Looking for inttypes.h -- Looking for inttypes.h - found -- Looking for nexttoward in m -- Looking for nexttoward in m - found -- Looking for mpi.h -- Looking for mpi.h - found -- Looking for wsyncup in /usr/lib64/libcurses.so -- Looking for wsyncup in /usr/lib64/libcurses.so - found -- Looking for rl_get_screen_size in /usr/lib64/libreadline.so;/usr/lib64/libhistory.so -- Looking for rl_get_screen_size in /usr/lib64/libreadline.so;/usr/lib64/libhistory.so - found -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Found PLPLOT: /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for plP_mmpcx in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for plP_mmpcx in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so - found -- OK for XYOUTS in plplot -- Looking for plGetDrvDir in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so -- Looking for plGetDrvDir in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so - not found -- checking for module 'netcdf' -- found netcdf, version 4.1.3 -- Could NOT find NETCDF (missing: NETCDF_INCLUDE_DIRS) CMake Error at CMakeLists.txt:404 (message): NetCDF version 3.5.1 or later is required but was not found. Use -DNETCDFDIR=DIR to specify the netcdf directory tree. Use -DNETCDF=OFF to not use it. (suitable Debian/Ubuntu package: libnetcdf-dev) (suitable Fedora package: netcdf-devel) -- Configuring incomplete, errors occurred! * ERROR: dev-lang/gdl-0.9.3 failed (configure phase): * cmake failed * * Call stack: * ebuild.sh, line 93: Called src_configure * environment, line 5696: Called configuration '-DPYTHON_MODULE=OFF' '-DPYTHON=OFF' * environment, line 5694: Called cmake-utils_src_configure * environment, line 1549: Called _execute_optionaly 'src_configure' * environment, line 576: Called enable_cmake-utils_src_configure * environment, line 1862: Called die * The specific snippet of code: * "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; * * If you need support, post the output of `emerge --info '=dev-lang/gdl-0.9.3'`, * the complete build log and the output of `emerge -pqv '=dev-lang/gdl-0.9.3'`. * The complete build log is located at '/var/tmp/portage/dev-lang/gdl-0.9.3/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-lang/gdl-0.9.3/temp/environment'. * Working directory: '/var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3_build' * S: '/var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3'