This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by cholmod configure 2.0.1, which was generated by GNU Autoconf 2.69. Invocation command line was $ /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --disable-dependency-tracking --docdir=/usr/share/doc/cholmod-2.0.1 --enable-shared --disable-static --with-blas=-lf77blas -lm -latlas --with-lapack=-latllapack -lf77blas -latlcblas -lm -latlas --with-cuda --with-doc --with-modify --with-matrixops --without-partition --with-supernodal ## --------- ## ## Platform. ## ## --------- ## hostname = leopard uname -m = x86_64 uname -r = 3.6.5-gentoo uname -s = Linux uname -v = #1 SMP Fri Nov 2 19:52:45 CET 2012 /usr/bin/uname -p = Intel(R) Core(TM) i7-2600 CPU @ 3.40GHz /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/lib64/portage/bin/ebuild-helpers PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /opt/bin PATH: /usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3 PATH: /opt/intel/composerxe-2013.0.079/bin/intel64 PATH: /opt/intel/composerxe-2013.0.079/mpirt/bin/intel64 PATH: /opt/intel/composerxe-2013.0.079/bin/ia32 PATH: /opt/intel/composerxe-2013.0.079/mpirt/bin/ia32 PATH: /usr/lib64/subversion/bin PATH: /opt/eagle-5.11.0/bin PATH: /opt/cuda/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2593: loading site script /usr/share/config.site | #!/bin/bash | # Copyright 2009 Gentoo Foundation | # Distributed under the terms of the GNU General Public License v2 | | TOPDIR=/usr/share/crossdev/include/site | | config_site_arch() { | local host=$(echo ${CHOST/-/ } | awk '{print $1}') | | [[ ${host/arm.*eb/} != ${host} ]] && host=armeb | [[ ${host/arm/} != ${host} ]] && [[ ${host} != armeb ]] && host=arm | | [[ ${host/mips.*el/} != ${host} ]] && host=mipsel | | #[[ ${host/i[4-5]/6} != ${host} ]] && host=i686 | | echo ${host} | } | | config_site_names() { | local site_arch=$(config_site_arch) | local sites="" | local x | | [[ ${CHOST/-linux-/} != $CHOST ]] && sites+=" linux ${site_arch}-linux" | [[ ${CHOST/darwin/} != $CHOST ]] && sites+=" darwin ${site_arch}-linux" | | [[ ${CHOST/-linux-uclibc/} != $CHOST ]] && sites+=" linux-uclibc ${site_arch}-linux-uclibc" | [[ ${CHOST/-linux-gnu/} != $CHOST ]] && sites+=" linux-gnu ${site_arch}-linux-gnu" | | [[ ${CHOST/-linux-uclibceabi/} != $CHOST ]] && sites+=" linux-uclibceabi ${site_arch}-linux-uclibceabi" | [[ ${CHOST/-linux-gnueabi/} != $CHOST ]] && sites+=" linux-gnueabi ${site_arch}-linux-gnueabi" | | for x in ${sites} ${CHOST}; do | [[ -e ${TOPDIR}/${x} ]] && echo ${TOPDIR}/${x} | done | } | | # Only kick in for cross-compiles so we don't break native builds #427184 | if [[ ${CBUILD:-${CHOST}} != ${CHOST} ]]; then | sites="$(config_site_names)" | if [[ ${sites} != "" ]]; then | for site in ${sites}; do | echo "$(basename $0): loading site script ${site}" | . ${site} | done | fi | unset site | unset sites | fi configure:2743: checking for a BSD-compatible install configure:2811: result: /usr/bin/install -c configure:2822: checking whether build environment is sane configure:2877: result: yes configure:3028: checking for a thread-safe mkdir -p configure:3067: result: /bin/mkdir -p configure:3074: checking for gawk configure:3090: found /usr/bin/gawk configure:3101: result: gawk configure:3112: checking whether make sets $(MAKE) configure:3134: result: yes configure:3250: checking build system type configure:3264: result: x86_64-pc-linux-gnu configure:3284: checking host system type configure:3297: result: x86_64-pc-linux-gnu configure:3338: checking how to print strings configure:3365: result: printf configure:3398: checking for style of include used by make configure:3426: result: GNU configure:3457: checking for x86_64-pc-linux-gnu-gcc configure:3473: found /usr/bin/x86_64-pc-linux-gnu-gcc configure:3484: result: x86_64-pc-linux-gnu-gcc configure:3753: checking for C compiler version configure:3762: x86_64-pc-linux-gnu-gcc --version >&5 x86_64-pc-linux-gnu-gcc (Gentoo 4.6.3 p1.6, pie-0.5.2) 4.6.3 Copyright (C) 2011 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3773: $? = 0 configure:3762: x86_64-pc-linux-gnu-gcc -v >&5 Using built-in specs. COLLECT_GCC=/usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3/x86_64-pc-linux-gnu-gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/4.6.3/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: /var/tmp/portage/sys-devel/gcc-4.6.3/work/gcc-4.6.3/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.6.3/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.6.3/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --without-ppl --without-cloog --enable-lto --enable-nls --without-included-gettext --with-system-zlib --enable-obsolete --disable-werror --enable-secureplt --enable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/python --enable-checking=release --enable-java-awt=gtk --enable-languages=c,c++,java,objc,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-targets=all --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.6.3 p1.6, pie-0.5.2' Thread model: posix gcc version 4.6.3 (Gentoo 4.6.3 p1.6, pie-0.5.2) configure:3773: $? = 0 configure:3762: x86_64-pc-linux-gnu-gcc -V >&5 x86_64-pc-linux-gnu-gcc: error: unrecognized option '-V' x86_64-pc-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:3773: $? = 1 configure:3762: x86_64-pc-linux-gnu-gcc -qversion >&5 x86_64-pc-linux-gnu-gcc: error: unrecognized option '-qversion' x86_64-pc-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:3773: $? = 1 configure:3793: checking whether the C compiler works configure:3815: x86_64-pc-linux-gnu-gcc -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:3819: $? = 0 configure:3867: result: yes configure:3870: checking for C compiler default output file name configure:3872: result: a.out configure:3878: checking for suffix of executables configure:3885: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:3889: $? = 0 configure:3911: result: configure:3933: checking whether we are cross compiling configure:3941: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:3945: $? = 0 configure:3952: ./conftest configure:3956: $? = 0 configure:3971: result: no configure:3976: checking for suffix of object files configure:3998: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:4002: $? = 0 configure:4023: result: o configure:4027: checking whether we are using the GNU C compiler configure:4046: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:4046: $? = 0 configure:4055: result: yes configure:4064: checking whether x86_64-pc-linux-gnu-gcc accepts -g configure:4084: x86_64-pc-linux-gnu-gcc -c -g conftest.c >&5 configure:4084: $? = 0 configure:4125: result: yes configure:4142: checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89 configure:4205: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:4205: $? = 0 configure:4218: result: none needed configure:4240: checking dependency style of x86_64-pc-linux-gnu-gcc configure:4351: result: none configure:4366: checking for a sed that does not truncate output configure:4430: result: /bin/sed configure:4448: checking for grep that handles long lines and -e configure:4506: result: /bin/grep configure:4511: checking for egrep configure:4573: result: /bin/grep -E configure:4578: checking for fgrep configure:4640: result: /bin/grep -F configure:4675: checking for ld used by x86_64-pc-linux-gnu-gcc configure:4742: result: /usr/x86_64-pc-linux-gnu/bin/ld configure:4749: checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld configure:4764: result: yes configure:4776: checking for BSD- or MS-compatible name lister (nm) configure:4825: result: /usr/bin/nm -B configure:4955: checking the name lister (/usr/bin/nm -B) interface configure:4962: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:4965: /usr/bin/nm -B "conftest.o" configure:4968: output 0000000000000000 B some_variable configure:4975: result: BSD nm configure:4978: checking whether ln -s works configure:4982: result: yes configure:4990: checking the maximum length of command line arguments configure:5125: result: 1572864 configure:5142: checking whether the shell understands some XSI constructs configure:5152: result: yes configure:5156: checking whether the shell understands "+=" configure:5162: result: yes configure:5197: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:5237: result: func_convert_file_noop configure:5244: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:5264: result: func_convert_file_noop configure:5271: checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files configure:5278: result: -r configure:5312: checking for x86_64-pc-linux-gnu-objdump configure:5328: found /usr/bin/x86_64-pc-linux-gnu-objdump configure:5339: result: x86_64-pc-linux-gnu-objdump configure:5411: checking how to recognize dependent libraries configure:5613: result: pass_all configure:5658: checking for x86_64-pc-linux-gnu-dlltool configure:5688: result: no configure:5698: checking for dlltool configure:5728: result: no configure:5758: checking how to associate runtime and link libraries configure:5785: result: printf %s\n configure:5802: checking for x86_64-pc-linux-gnu-ar configure:5818: found /usr/bin/x86_64-pc-linux-gnu-ar configure:5829: result: x86_64-pc-linux-gnu-ar configure:5910: checking for archiver @FILE support configure:5927: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:5927: $? = 0 configure:5930: x86_64-pc-linux-gnu-ar cru libconftest.a @conftest.lst >&5 configure:5933: $? = 0 configure:5938: x86_64-pc-linux-gnu-ar cru libconftest.a @conftest.lst >&5 x86_64-pc-linux-gnu-ar: conftest.o: No such file or directory configure:5941: $? = 1 configure:5953: result: @ configure:5971: checking for x86_64-pc-linux-gnu-strip configure:5987: found /usr/bin/x86_64-pc-linux-gnu-strip configure:5998: result: x86_64-pc-linux-gnu-strip configure:6070: checking for x86_64-pc-linux-gnu-ranlib configure:6086: found /usr/bin/x86_64-pc-linux-gnu-ranlib configure:6097: result: x86_64-pc-linux-gnu-ranlib configure:6239: checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object configure:6359: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:6362: $? = 0 configure:6366: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:6369: $? = 0 configure:6435: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c conftstm.o >&5 configure:6438: $? = 0 configure:6476: result: ok configure:6513: checking for sysroot configure:6543: result: no configure:6620: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:6623: $? = 0 configure:6759: checking for x86_64-pc-linux-gnu-mt configure:6789: result: no configure:6799: checking for mt configure:6815: found /usr/sbin/mt configure:6826: result: mt configure:6849: checking if mt is a manifest tool configure:6855: mt '-?' usage: mt [-v] [--version] [-h] [ -f device ] command [ count ] configure:6863: result: no configure:7505: checking how to run the C preprocessor configure:7536: x86_64-pc-linux-gnu-gcc -E conftest.c configure:7536: $? = 0 configure:7550: x86_64-pc-linux-gnu-gcc -E conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:7550: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | /* end confdefs.h. */ | #include configure:7575: result: x86_64-pc-linux-gnu-gcc -E configure:7595: x86_64-pc-linux-gnu-gcc -E conftest.c configure:7595: $? = 0 configure:7609: x86_64-pc-linux-gnu-gcc -E conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:7609: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | /* end confdefs.h. */ | #include configure:7638: checking for ANSI C header files configure:7658: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7658: $? = 0 configure:7731: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:7731: $? = 0 configure:7731: ./conftest configure:7731: $? = 0 configure:7742: result: yes configure:7755: checking for sys/types.h configure:7755: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7755: $? = 0 configure:7755: result: yes configure:7755: checking for sys/stat.h configure:7755: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7755: $? = 0 configure:7755: result: yes configure:7755: checking for stdlib.h configure:7755: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7755: $? = 0 configure:7755: result: yes configure:7755: checking for string.h configure:7755: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7755: $? = 0 configure:7755: result: yes configure:7755: checking for memory.h configure:7755: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7755: $? = 0 configure:7755: result: yes configure:7755: checking for strings.h configure:7755: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7755: $? = 0 configure:7755: result: yes configure:7755: checking for inttypes.h configure:7755: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7755: $? = 0 configure:7755: result: yes configure:7755: checking for stdint.h configure:7755: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7755: $? = 0 configure:7755: result: yes configure:7755: checking for unistd.h configure:7755: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7755: $? = 0 configure:7755: result: yes configure:7769: checking for dlfcn.h configure:7769: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:7769: $? = 0 configure:7769: result: yes configure:7975: checking for objdir configure:7990: result: .libs configure:8261: checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions configure:8279: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C [enabled by default] configure:8283: $? = 0 configure:8296: result: no configure:8623: checking for x86_64-pc-linux-gnu-gcc option to produce PIC configure:8630: result: -fPIC -DPIC configure:8638: checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works configure:8656: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb -fPIC -DPIC -DPIC conftest.c >&5 configure:8660: $? = 0 configure:8673: result: yes configure:8702: checking if x86_64-pc-linux-gnu-gcc static flag -static works configure:8730: result: yes configure:8745: checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o configure:8766: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb -o out/conftest2.o conftest.c >&5 configure:8770: $? = 0 configure:8792: result: yes configure:8800: checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o configure:8847: result: yes configure:8880: checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries configure:10040: result: yes configure:10077: checking whether -lc should be explicitly linked in configure:10085: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:10088: $? = 0 configure:10103: x86_64-pc-linux-gnu-gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1 configure:10106: $? = 0 configure:10120: result: no configure:10280: checking dynamic linker characteristics configure:10804: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed -Wl,-rpath -Wl,/foo conftest.c >&5 configure:10804: $? = 0 configure:11026: result: GNU/Linux ld.so configure:11133: checking how to hardcode library paths into programs configure:11158: result: immediate configure:11698: checking whether stripping libraries is possible configure:11703: result: yes configure:11738: checking if libtool supports shared libraries configure:11740: result: yes configure:11743: checking whether to build shared libraries configure:11764: result: yes configure:11767: checking whether to build static libraries configure:11771: result: no configure:11816: checking for x86_64-pc-linux-gnu-gcc configure:11843: result: x86_64-pc-linux-gnu-gcc configure:12112: checking for C compiler version configure:12121: x86_64-pc-linux-gnu-gcc --version >&5 x86_64-pc-linux-gnu-gcc (Gentoo 4.6.3 p1.6, pie-0.5.2) 4.6.3 Copyright (C) 2011 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:12132: $? = 0 configure:12121: x86_64-pc-linux-gnu-gcc -v >&5 Using built-in specs. COLLECT_GCC=/usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3/x86_64-pc-linux-gnu-gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/4.6.3/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: /var/tmp/portage/sys-devel/gcc-4.6.3/work/gcc-4.6.3/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.6.3/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.6.3/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --without-ppl --without-cloog --enable-lto --enable-nls --without-included-gettext --with-system-zlib --enable-obsolete --disable-werror --enable-secureplt --enable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/python --enable-checking=release --enable-java-awt=gtk --enable-languages=c,c++,java,objc,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-targets=all --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.6.3 p1.6, pie-0.5.2' Thread model: posix gcc version 4.6.3 (Gentoo 4.6.3 p1.6, pie-0.5.2) configure:12132: $? = 0 configure:12121: x86_64-pc-linux-gnu-gcc -V >&5 x86_64-pc-linux-gnu-gcc: error: unrecognized option '-V' x86_64-pc-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:12132: $? = 1 configure:12121: x86_64-pc-linux-gnu-gcc -qversion >&5 x86_64-pc-linux-gnu-gcc: error: unrecognized option '-qversion' x86_64-pc-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:12132: $? = 1 configure:12136: checking whether we are using the GNU C compiler configure:12164: result: yes configure:12173: checking whether x86_64-pc-linux-gnu-gcc accepts -g configure:12234: result: yes configure:12251: checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89 configure:12327: result: none needed configure:12349: checking dependency style of x86_64-pc-linux-gnu-gcc configure:12460: result: none configure:12480: checking float.h usability configure:12480: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12480: $? = 0 configure:12480: result: yes configure:12480: checking float.h presence configure:12480: x86_64-pc-linux-gnu-gcc -E conftest.c configure:12480: $? = 0 configure:12480: result: yes configure:12480: checking for float.h configure:12480: result: yes configure:12480: checking limits.h usability configure:12480: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12480: $? = 0 configure:12480: result: yes configure:12480: checking limits.h presence configure:12480: x86_64-pc-linux-gnu-gcc -E conftest.c configure:12480: $? = 0 configure:12480: result: yes configure:12480: checking for limits.h configure:12480: result: yes configure:12480: checking stddef.h usability configure:12480: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12480: $? = 0 configure:12480: result: yes configure:12480: checking stddef.h presence configure:12480: x86_64-pc-linux-gnu-gcc -E conftest.c configure:12480: $? = 0 configure:12480: result: yes configure:12480: checking for stddef.h configure:12480: result: yes configure:12480: checking for stdlib.h configure:12480: result: yes configure:12480: checking for string.h configure:12480: result: yes configure:12492: checking for uid_t in sys/types.h configure:12511: result: yes configure:12522: checking for int32_t configure:12522: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12522: $? = 0 configure:12522: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 conftest.c: In function 'main': conftest.c:66:53: warning: integer overflow in expression [-Woverflow] conftest.c:65:12: error: size of array 'test_array' is negative conftest.c:65:12: error: storage size of 'test_array' isn't constant configure:12522: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | enum { N = 32 / 2 - 1 }; | int | main () | { | static int test_array [1 - 2 * !((int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 1) | < (int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 2))]; | test_array [0] = 0; | return test_array [0]; | | ; | return 0; | } configure:12522: result: yes configure:12533: checking for mode_t configure:12533: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12533: $? = 0 configure:12533: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 conftest.c: In function 'main': conftest.c:64:21: error: expected expression before ')' token configure:12533: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((mode_t))) | return 0; | ; | return 0; | } configure:12533: result: yes configure:12544: checking for off_t configure:12544: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12544: $? = 0 configure:12544: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 conftest.c: In function 'main': conftest.c:64:20: error: expected expression before ')' token configure:12544: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((off_t))) | return 0; | ; | return 0; | } configure:12544: result: yes configure:12555: checking for pid_t configure:12555: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12555: $? = 0 configure:12555: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 conftest.c: In function 'main': conftest.c:64:20: error: expected expression before ')' token configure:12555: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((pid_t))) | return 0; | ; | return 0; | } configure:12555: result: yes configure:12566: checking for size_t configure:12566: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12566: $? = 0 configure:12566: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 conftest.c: In function 'main': conftest.c:64:21: error: expected expression before ')' token configure:12566: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:12566: result: yes configure:12577: checking for ssize_t configure:12577: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12577: $? = 0 configure:12577: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 conftest.c: In function 'main': conftest.c:64:22: error: expected expression before ')' token configure:12577: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ssize_t))) | return 0; | ; | return 0; | } configure:12577: result: yes configure:12588: checking whether struct tm is in sys/time.h or time.h configure:12608: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12608: $? = 0 configure:12615: result: time.h configure:12623: checking for struct tm.tm_zone configure:12623: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:12623: $? = 0 configure:12623: result: yes configure:12694: checking for working alloca.h configure:12711: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:12711: $? = 0 configure:12719: result: yes configure:12727: checking for alloca configure:12764: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:12764: $? = 0 configure:12772: result: yes configure:12878: checking for error_at_line configure:12894: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:12894: $? = 0 configure:12902: result: yes configure:12915: checking for stdlib.h configure:12915: result: yes configure:12925: checking for GNU libc compatible malloc configure:12949: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:12949: $? = 0 configure:12949: ./conftest configure:12949: $? = 0 configure:12959: result: yes configure:12980: checking whether time.h and sys/time.h may both be included configure:13000: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:13000: $? = 0 configure:13007: result: yes configure:13021: checking for sys/time.h configure:13021: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:13021: $? = 0 configure:13021: result: yes configure:13021: checking for unistd.h configure:13021: result: yes configure:13042: checking for alarm configure:13042: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13042: $? = 0 configure:13042: result: yes configure:13055: checking for working mktime configure:13257: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13257: $? = 0 configure:13257: ./conftest configure:13257: $? = 0 configure:13267: result: yes configure:13280: checking for stdlib.h configure:13280: result: yes configure:13290: checking for GNU libc compatible realloc configure:13314: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13314: $? = 0 configure:13314: ./conftest configure:13314: $? = 0 configure:13324: result: yes configure:13345: checking for working strtod configure:13386: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13386: $? = 0 configure:13386: ./conftest configure:13386: $? = 0 configure:13396: result: yes configure:13461: checking for atexit configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for localtime_r configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for mblen configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for putenv configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for realpath configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for rpmatch configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for select configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for setenv configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for stime configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for strtol configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for strtoul configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for strtoull configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13461: checking for tzset configure:13461: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13461: $? = 0 configure:13461: result: yes configure:13472: checking for sqrt in -lm configure:13497: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c -lm >&5 conftest.c:60:6: warning: conflicting types for built-in function 'sqrt' [enabled by default] configure:13497: $? = 0 configure:13506: result: yes configure:13518: checking for clock_gettime in -lrt configure:13543: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed conftest.c -lrt -lm >&5 configure:13543: $? = 0 configure:13552: result: yes configure:13577: checking for x86_64-pc-linux-gnu-pkg-config configure:13610: result: no configure:13620: checking for pkg-config configure:13638: found /usr/bin/pkg-config configure:13650: result: /usr/bin/pkg-config configure:13675: checking pkg-config is at least version 0.9.0 configure:13678: result: yes configure:13711: checking for SUITESPARSECONFIG configure:13718: $PKG_CONFIG --exists --print-errors "suitesparseconfig" configure:13721: $? = 0 configure:13735: $PKG_CONFIG --exists --print-errors "suitesparseconfig" configure:13738: $? = 0 configure:13796: result: yes configure:13825: checking SuiteSparse_config.h usability configure:13825: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -ggdb conftest.c >&5 configure:13825: $? = 0 configure:13825: result: yes configure:13825: checking SuiteSparse_config.h presence configure:13825: x86_64-pc-linux-gnu-gcc -E conftest.c configure:13825: $? = 0 configure:13825: result: yes configure:13825: checking for SuiteSparse_config.h configure:13825: result: yes configure:13828: checking for SuiteSparse_malloc in -lsuitesparseconfig configure:13853: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -ggdb -Wl,-O1 -Wl,--as-needed -lsuitesparseconfig conftest.c -lsuitesparseconfig -lrt -lm >&5 configure:13853: $? = 0 configure:13863: result: yes configure:13899: checking whether to build user guide configure:13912: result: yes configure:13916: checking for pdflatex configure:13934: found /usr/bin/pdflatex configure:13947: result: /usr/bin/pdflatex configure:13960: checking for bibtex configure:13978: found /usr/bin/bibtex configure:13991: result: /usr/bin/bibtex configure:14002: checking for a sed that does not truncate output configure:14066: result: /bin/sed configure:14075: checking for gawk configure:14102: result: gawk configure:14113: checking whether ln -s works configure:14117: result: yes configure:14126: checking for expand configure:14144: found /usr/bin/expand configure:14157: result: /usr/bin/expand configure:14231: checking for CUDA configure:14238: $PKG_CONFIG --exists --print-errors "cuda" Package cuda was not found in the pkg-config search path. Perhaps you should add the directory containing `cuda.pc' to the PKG_CONFIG_PATH environment variable No package 'cuda' found configure:14241: $? = 1 configure:14255: $PKG_CONFIG --exists --print-errors "cuda" Package cuda was not found in the pkg-config search path. Perhaps you should add the directory containing `cuda.pc' to the PKG_CONFIG_PATH environment variable No package 'cuda' found configure:14258: $? = 1 configure:14272: result: no No package 'cuda' found configure:14288: error: Package requirements (cuda) were not met: No package 'cuda' found Consider adjusting the PKG_CONFIG_PATH environment variable if you installed software in a non-standard prefix. Alternatively, you may set the environment variables CUDA_CFLAGS and CUDA_LIBS to avoid the need to call pkg-config. See the pkg-config man page for more details. ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_int32_t=yes ac_cv_env_AMD_CFLAGS_set= ac_cv_env_AMD_CFLAGS_value= ac_cv_env_AMD_LIBS_set= ac_cv_env_AMD_LIBS_value= ac_cv_env_BLAS_CFLAGS_set= ac_cv_env_BLAS_CFLAGS_value= ac_cv_env_BLAS_LIBS_set= ac_cv_env_BLAS_LIBS_value= ac_cv_env_CAMD_CFLAGS_set= ac_cv_env_CAMD_CFLAGS_value= ac_cv_env_CAMD_LIBS_set= ac_cv_env_CAMD_LIBS_value= ac_cv_env_CCOLAMD_CFLAGS_set= ac_cv_env_CCOLAMD_CFLAGS_value= ac_cv_env_CCOLAMD_LIBS_set= ac_cv_env_CCOLAMD_LIBS_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-march=native -O2 -ggdb' ac_cv_env_COLAMD_CFLAGS_set= ac_cv_env_COLAMD_CFLAGS_value= ac_cv_env_COLAMD_LIBS_set= ac_cv_env_COLAMD_LIBS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CUDA_CFLAGS_set= ac_cv_env_CUDA_CFLAGS_value= ac_cv_env_CUDA_LIBS_set= ac_cv_env_CUDA_LIBS_value= ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FFLAGS_set=set ac_cv_env_FFLAGS_value='-O2 -pipe' ac_cv_env_LAPACK_CFLAGS_set= ac_cv_env_LAPACK_CFLAGS_value= ac_cv_env_LAPACK_LIBS_set= ac_cv_env_LAPACK_LIBS_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-Wl,-O1 -Wl,--as-needed' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_METIS_CFLAGS_set= ac_cv_env_METIS_CFLAGS_value= ac_cv_env_METIS_LIBS_set= ac_cv_env_METIS_LIBS_value= ac_cv_env_PKG_CONFIG_LIBDIR_set= ac_cv_env_PKG_CONFIG_LIBDIR_value= ac_cv_env_PKG_CONFIG_PATH_set=set ac_cv_env_PKG_CONFIG_PATH_value=/usr/lib64/pkgconfig ac_cv_env_PKG_CONFIG_set= ac_cv_env_PKG_CONFIG_value= ac_cv_env_SUITESPARSECONFIG_CFLAGS_set= ac_cv_env_SUITESPARSECONFIG_CFLAGS_value= ac_cv_env_SUITESPARSECONFIG_LIBS_set= ac_cv_env_SUITESPARSECONFIG_LIBS_value= ac_cv_env_build_alias_set=set ac_cv_env_build_alias_value=x86_64-pc-linux-gnu ac_cv_env_host_alias_set=set ac_cv_env_host_alias_value=x86_64-pc-linux-gnu ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_func_alarm=yes ac_cv_func_alloca_works=yes ac_cv_func_atexit=yes ac_cv_func_localtime_r=yes ac_cv_func_malloc_0_nonnull=yes ac_cv_func_mblen=yes ac_cv_func_putenv=yes ac_cv_func_realloc_0_nonnull=yes ac_cv_func_realpath=yes ac_cv_func_rpmatch=yes ac_cv_func_select=yes ac_cv_func_setenv=yes ac_cv_func_stime=yes ac_cv_func_strtod=yes ac_cv_func_strtol=yes ac_cv_func_strtoul=yes ac_cv_func_strtoull=yes ac_cv_func_tzset=yes ac_cv_func_working_mktime=yes ac_cv_header_SuiteSparse_config_h=yes ac_cv_header_dlfcn_h=yes ac_cv_header_float_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_limits_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_time=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_error_at_line=yes ac_cv_lib_m_sqrt=yes ac_cv_lib_rt_clock_gettime=yes ac_cv_lib_suitesparseconfig_SuiteSparse_malloc=yes ac_cv_member_struct_tm_tm_zone=yes ac_cv_objext=o ac_cv_path_BIBTEX=/usr/bin/bibtex ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_EXPAND=/usr/bin/expand ac_cv_path_FGREP='/bin/grep -F' ac_cv_path_GREP=/bin/grep ac_cv_path_PDFLATEX=/usr/bin/pdflatex ac_cv_path_SED=/bin/sed ac_cv_path_ac_pt_PKG_CONFIG=/usr/bin/pkg-config ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AR=x86_64-pc-linux-gnu-ar ac_cv_prog_AWK=gawk ac_cv_prog_CC=x86_64-pc-linux-gnu-gcc ac_cv_prog_CPP='x86_64-pc-linux-gnu-gcc -E' ac_cv_prog_OBJDUMP=x86_64-pc-linux-gnu-objdump ac_cv_prog_RANLIB=x86_64-pc-linux-gnu-ranlib ac_cv_prog_STRIP=x86_64-pc-linux-gnu-strip ac_cv_prog_ac_ct_MANIFEST_TOOL=mt ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_make_make_set=yes ac_cv_struct_tm=time.h ac_cv_type_mode_t=yes ac_cv_type_off_t=yes ac_cv_type_pid_t=yes ac_cv_type_size_t=yes ac_cv_type_ssize_t=yes ac_cv_type_uid_t=yes ac_cv_working_alloca_h=yes am_cv_CC_dependencies_compiler_type=none ax_cv_has_suitesparseconfig=yes ax_cv_symbol=SuiteSparse_malloc lt_cv_ar_at_file=@ lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/x86_64-pc-linux-gnu/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=yes lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop pkg_cv_SUITESPARSECONFIG_CFLAGS=' ' pkg_cv_SUITESPARSECONFIG_LIBS='-lsuitesparseconfig ' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/missing --run aclocal-1.12' ALLOCA='' AMDEPBACKSLASH='' AMDEP_FALSE='' AMDEP_TRUE='#' AMD_CFLAGS='' AMD_LIBS='' AMD_PC='' AMTAR='$${TAR-tar}' AR='x86_64-pc-linux-gnu-ar' AUTOCONF='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/missing --run autoconf' AUTOHEADER='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/missing --run autoheader' AUTOMAKE='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/missing --run automake-1.12' AWK='gawk' BIBTEX='/usr/bin/bibtex' BLAS_CFLAGS='' BLAS_LIBS='' BLAS_PC='' BUILD_DOCS_FALSE='#' BUILD_DOCS_TRUE='' CAMD_CFLAGS='' CAMD_LIBS='' CAMD_PC='' CC='x86_64-pc-linux-gnu-gcc' CCDEPMODE='depmode=none' CCOLAMD_CFLAGS='' CCOLAMD_LIBS='' CCOLAMD_PC='' CFLAGS='-march=native -O2 -ggdb' COLAMD_CFLAGS='' COLAMD_LIBS='' COLAMD_PC='' CPP='x86_64-pc-linux-gnu-gcc -E' CPPFLAGS='' CUDA_CFLAGS='' CUDA_LIBS='' CUDA_PC='' CYGPATH_W='echo' DEFS='' DEPDIR='.deps' DLLTOOL='false' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' EXPAND='/usr/bin/expand' F77='' FFLAGS='-O2 -pipe' FGREP='/bin/grep -F' FLIBS='' GREP='/bin/grep' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LAPACK_CFLAGS='' LAPACK_LIBS='' LAPACK_PC='' LD='/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64' LDFLAGS='-Wl,-O1 -Wl,--as-needed' LIBOBJS='' LIBS='-lrt -lm ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' MAKEINFO='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/missing --run makeinfo' MANIFEST_TOOL=':' METIS_CFLAGS='' METIS_LIBS='' METIS_PC='' MKDIR_P='/bin/mkdir -p' NM='/usr/bin/nm -B' NMEDIT='' OBJDUMP='x86_64-pc-linux-gnu-objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='cholmod' PACKAGE_BUGREPORT='davis@cise.ufl.edu' PACKAGE_NAME='cholmod' PACKAGE_STRING='cholmod 2.0.1' PACKAGE_TARNAME='cholmod' PACKAGE_URL='' PACKAGE_VERSION='2.0.1' PATH_SEPARATOR=':' PC_LIBS='' PDFLATEX='/usr/bin/pdflatex' PKG_CONFIG='/usr/bin/pkg-config' PKG_CONFIG_LIBDIR='' PKG_CONFIG_PATH='/usr/lib64/pkgconfig' POW_LIB='' RANLIB='x86_64-pc-linux-gnu-ranlib' SED='/bin/sed' SET_MAKE='' SHELL='/bin/sh' STRIP='x86_64-pc-linux-gnu-strip' SUITESPARSECONFIG_CFLAGS=' ' SUITESPARSECONFIG_LIBS='-lsuitesparseconfig ' SUITESPARSECONFIG_PC='suitesparseconfig' VERSION='2.0.1' WITH_CHECK_FALSE='' WITH_CHECK_TRUE='' WITH_CHOLESKY_FALSE='' WITH_CHOLESKY_TRUE='' WITH_MATRIXOPS_FALSE='' WITH_MATRIXOPS_TRUE='' WITH_MODIFY_FALSE='' WITH_MODIFY_TRUE='' WITH_PARTITION_FALSE='' WITH_PARTITION_TRUE='' WITH_SUPERNODAL_FALSE='' WITH_SUPERNODAL_TRUE='' ac_ct_AR='' ac_ct_CC='' ac_ct_DUMPBIN='' ac_ct_F77='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='#' am__include='include' am__isrc=' -I$(srcdir)' am__leading_dot='.' am__nodep='' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='x86_64-pc-linux-gnu' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='/usr/share' datarootdir='${prefix}/share' docdir='/usr/share/doc/cholmod-2.0.1' dvidir='${docdir}' exec_prefix='NONE' host='x86_64-pc-linux-gnu' host_alias='x86_64-pc-linux-gnu' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='/usr/share/info' install_sh='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/install-sh' libdir='/usr/lib64' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='/var/lib' mandir='/usr/share/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "cholmod" #define PACKAGE_TARNAME "cholmod" #define PACKAGE_VERSION "2.0.1" #define PACKAGE_STRING "cholmod 2.0.1" #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" #define PACKAGE_URL "" #define PACKAGE "cholmod" #define VERSION "2.0.1" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_FLOAT_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STDDEF_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_STRUCT_TM_TM_ZONE 1 #define HAVE_TM_ZONE 1 #define HAVE_ALLOCA_H 1 #define HAVE_ALLOCA 1 #define HAVE_STDLIB_H 1 #define HAVE_MALLOC 1 #define TIME_WITH_SYS_TIME 1 #define HAVE_SYS_TIME_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ALARM 1 #define HAVE_STDLIB_H 1 #define HAVE_REALLOC 1 #define HAVE_ATEXIT 1 #define HAVE_LOCALTIME_R 1 #define HAVE_MBLEN 1 #define HAVE_PUTENV 1 #define HAVE_REALPATH 1 #define HAVE_RPMATCH 1 #define HAVE_SELECT 1 #define HAVE_SETENV 1 #define HAVE_STIME 1 #define HAVE_STRTOL 1 #define HAVE_STRTOUL 1 #define HAVE_STRTOULL 1 #define HAVE_TZSET 1 #define HAVE_LIBM 1 #define HAVE_LIBRT 1 #define HAVE_SUITESPARSECONFIG 1 configure: exit 1