[Linux]~> rm -rf /data/gentoo/var/tmp/portage/sys-libs/glibc-9999 [Linux]~> emerge -v "=sys-libs/glibc-9999" These are the packages that would be merged, in order: Calculating dependencies... done! [ebuild N *] sys-libs/glibc-9999::gentoo USE="-debug -gd (-hardened) (-multilib) -profile (-selinux) -systemtap -vanilla" 0 kB Total: 1 package (1 new), Size of downloads: 0 kB >>> Verifying ebuild manifests >>> Emerging (1 of 1) sys-libs/glibc-9999 make -j32 -s glibc-test make -j32 -s glibc-test >>> Unpacking source... * Auto adding -march=x86_64 to CFLAGS_x86 #185404 * Checking gcc for __thread support ... [ ok ] * Checking kernel version (2.6.18 >= 2.6.16) ... [ ok ] * Checking linux-headers version (3.4.0 >= 2.6.16) ... [ ok ] GIT update --> repository: http://sourceware.org/git/glibc.git at the commit: 2d83a317e90894269ed22fac922acb1bd7f218d0 branch: master storage directory: "/data/gentoo/usr/portage/distfiles/egit-src/glibc.git" checkout type: bare repository Cloning into '/data/gentoo/var/tmp/portage/sys-libs/glibc-9999/work/glibc-9999'... done. Branch branch-master set up to track remote branch master from origin. Switched to a new branch 'branch-master' >>> Unpacked to /data/gentoo/var/tmp/portage/sys-libs/glibc-9999/work/glibc-9999 GIT update --> repository: http://sourceware.org/git/glibc-ports.git at the commit: 94cef7a165e20ea4825e5cafaa7a9a619cb1455f branch: master storage directory: "/data/gentoo/usr/portage/distfiles/egit-src/glibc-ports.git" checkout type: bare repository fatal: destination path '/data/gentoo/var/tmp/portage/sys-libs/glibc-9999/work/glibc-9999/ports' already exists and is not an empty directory. * ERROR: sys-libs/glibc-9999 failed (unpack phase): * git-2_move_source: sync to "/data/gentoo/var/tmp/portage/sys-libs/glibc-9999/work/glibc-9999/ports" failed * * Call stack: * ebuild.sh, line 85: Called call-ebuildshell 'src_unpack' * environment, line 733: Called src_unpack * environment, line 4003: Called eblit-run 'src_unpack' * environment, line 958: Called eblit-glibc-src_unpack * src_unpack.eblit, line 168: Called toolchain-glibc_src_unpack * src_unpack.eblit, line 89: Called git-2_src_unpack * environment, line 2791: Called git-2_move_source * environment, line 2742: Called die * The specific snippet of code: * ${MOVE_COMMAND} "${EGIT_SOURCEDIR}" || die "${FUNCNAME}: sync to \"${EGIT_SOURCEDIR}\" failed"; * * If you need support, post the output of `emerge --info '=sys-libs/glibc-9999'`, * the complete build log and the output of `emerge -pqv '=sys-libs/glibc-9999'`. * The complete build log is located at '/data/gentoo/var/tmp/portage/sys-libs/glibc-9999/temp/build.log'. * The ebuild environment file is located at '/data/gentoo/var/tmp/portage/sys-libs/glibc-9999/temp/environment'. * Working directory: '/data/gentoo/usr/portage/distfiles/egit-src/glibc-ports.git' * S: '/data/gentoo/var/tmp/portage/sys-libs/glibc-9999/work/glibc-9999' ------------------------------------------------------------------------------- [Linux]~> emerge --info '=sys-libs/glibc-9999' Portage 2.2.01.20757-prefix (prefix/linux/amd64, gcc-4.6.3, unavailable, 2.6.18-274.12.1.0.1.el5 x86_64) ================================================================= System Settings ================================================================= System uname: Linux-2.6.18-274.12.1.0.1.el5-x86_64-Intel-R-_Xeon-R-_CPU_X7560_@_2.27GHz-with-redhat-5.7-Tikanga Timestamp of tree: Wed, 08 Aug 2012 21:25:42 +0000 app-shells/bash: 4.2_p36::gentoo_prefix dev-lang/python: 2.7.3-r2::gentoo_prefix dev-util/cmake: 2.8.8-r3::gentoo_prefix dev-util/pkgconfig: 0.27::gentoo_prefix sys-devel/autoconf: 2.69::gentoo_prefix sys-devel/automake: 1.11.5::gentoo_prefix, 1.12.2::gentoo_prefix sys-devel/binutils: 2.22-r1::gentoo_prefix sys-devel/gcc: 4.6.3::gentoo_prefix sys-devel/gcc-config: 1.5-r2::gentoo_prefix sys-devel/libtool: 2.4.2::gentoo_prefix sys-devel/make: 3.82::gentoo_prefix sys-kernel/linux-headers: 3.4-r1::gentoo_prefix (virtual/os-headers) Repositories: gentoo_prefix science ACCEPT_KEYWORDS="~amd64-linux" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/portage /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -O2 -pipe" DISTDIR="/data/gentoo/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles force-prefix news parallel-fetch parse-eapi-ebuild-head preserve-libs protect-owned sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="-march=native -O2 -pipe" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="C" LDFLAGS="-Wl,-O1" MAKEOPTS="-j32" PKGDIR="/data/gentoo/usr/portage/packages" PORTAGE_CONFIGROOT="/data/gentoo/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/data/gentoo/var/tmp" PORTDIR="/data/gentoo/usr/portage" PORTDIR_OVERLAY="/data/gentoo/var/lib/layman/science" SYNC="rsync://rsync.prefix.freens.org/gentoo-portage-prefix" USE="X amd64 bash-completion berkdb bindist blas bzip2 cairo cli cracklib crypt curl curlwrappers cxx emacs flatfile fortran freetds gcj gdbm git gtk gzip iconv ipv6 libcaca mmx modules mpi mudflap ncurses nls nptl nptlonly odbc openmp pango pcre pdf posix postgres pppd prefix readline samba sasl session spell sse sse2 ssl subversion sysfs tcl tcpd threads tk truetype unicode xft xml xorg zlib" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" PHP_TARGETS="php5-3" PYTHON_TARGETS="python3_2 python2_7" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="radeon" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON