--- setup.py.orig 2012-01-06 04:59:53.000000000 +0000 +++ setup.py 2012-01-06 06:21:48.000000000 +0000 @@ -2,58 +2,58 @@ from glob import glob # directory containing libblas and liblapack -ATLAS_LIB_DIR = '/usr/lib' +ATLAS_LIB_DIR = '' # Set to 1 if you are using the random number generators in the GNU # Scientific Library. BUILD_GSL = 0 # Directory containing libgsl (used only when BUILD_GSL = 1). -GSL_LIB_DIR = '/usr/lib' +GSL_LIB_DIR = '' # Directory containing the GSL header files (used only when BUILD_GSL = 1). -GSL_INC_DIR = '/usr/include/gsl' +GSL_INC_DIR = '' # Set to 1 if you are installing the fftw module. BUILD_FFTW = 0 # Directory containing libfftw3 (used only when BUILD_FFTW = 1). -FFTW_LIB_DIR = '/usr/lib' +FFTW_LIB_DIR = '' # Directory containing fftw.h (used only when BUILD_FFTW = 1). -FFTW_INC_DIR = '/usr/include' +FFTW_INC_DIR = '' # Set to 1 if you are installing the glpk module. BUILD_GLPK = 0 # Directory containing libglpk (used only when BUILD_GLPK = 1). -GLPK_LIB_DIR = '/usr/lib' +GLPK_LIB_DIR = '' # Directory containing glpk.h (used only when BUILD_GLPK = 1). -GLPK_INC_DIR = '/usr/include' +GLPK_INC_DIR = '' # Set to 1 if you are installing the DSDP module. BUILD_DSDP = 0 # Directory containing libdsdp (used only when BUILD_DSDP = 1). -DSDP_LIB_DIR = '/usr/lib' +DSDP_LIB_DIR = '' # Directory containing dsdp5.h (used only when BUILD_DSDP = 1). -DSDP_INC_DIR = '/usr/include' +DSDP_INC_DIR = '' extmods = [] # optional modules if BUILD_GSL: - gsl = Extension('gsl', libraries = ['m', 'gsl', 'blas'], + gsl = Extension('gsl', libraries = ['gsl'], include_dirs = [ GSL_INC_DIR ], library_dirs = [ GSL_LIB_DIR ], sources = ['C/gsl.c'] ) extmods += [gsl]; if BUILD_FFTW: - fftw = Extension('fftw', libraries = ['fftw3', 'blas'], + fftw = Extension('fftw', libraries = ['fftw3'], include_dirs = [ FFTW_INC_DIR ], library_dirs = [ FFTW_LIB_DIR, ATLAS_LIB_DIR ], sources = ['C/fftw.c'] ) @@ -67,7 +67,7 @@ extmods += [glpk]; if BUILD_DSDP: - dsdp = Extension('dsdp', libraries = ['dsdp', 'blas', 'lapack'], + dsdp = Extension('dsdp', libraries = ['dsdp'], include_dirs = [ DSDP_INC_DIR ], library_dirs = [ DSDP_LIB_DIR, ATLAS_LIB_DIR ], sources = ['C/dsdp.c'] ) @@ -85,7 +85,7 @@ else: MACROS = [] -base = Extension('base', libraries = ['m','lapack','blas'], +base = Extension('base', libraries = ['lapack'], library_dirs = [ ATLAS_LIB_DIR ], define_macros = MACROS, sources = ['C/base.c','C/dense.c','C/sparse.c']) @@ -95,22 +95,16 @@ define_macros = MACROS, sources = ['C/blas.c'] ) -lapack = Extension('lapack', libraries = ['lapack','blas'], +lapack = Extension('lapack', libraries = ['lapack'], library_dirs = [ ATLAS_LIB_DIR ], define_macros = MACROS, sources = ['C/lapack.c'] ) umfpack = Extension('umfpack', - include_dirs = [ 'C/SuiteSparse/UMFPACK/Include', - 'C/SuiteSparse/AMD/Include', 'C/SuiteSparse/AMD/Source', - 'C/SuiteSparse/UFconfig' ], library_dirs = [ ATLAS_LIB_DIR ], define_macros = MACROS, - libraries = [ 'blas', 'lapack'], - sources = [ 'C/umfpack.c', - 'C/SuiteSparse/UMFPACK/Source/umfpack_global.c', - 'C/SuiteSparse/UMFPACK/Source/umfpack_tictoc.c' ] + - glob('C/SuiteSparse_cvxopt_extra/umfpack/*')) + libraries = [ 'umfpack' ], + sources = [ 'C/umfpack.c' ]) # Build for int or long? import sys @@ -118,28 +112,16 @@ cholmod = Extension('cholmod', library_dirs = [ ATLAS_LIB_DIR ], - libraries = ['lapack', 'blas'], - include_dirs = [ 'C/SuiteSparse/CHOLMOD/Include', - 'C/SuiteSparse/COLAMD', 'C/SuiteSparse/AMD/Include', - 'C/SuiteSparse/UFconfig', 'C/SuiteSparse/COLAMD/Include' ], + libraries = ['cholmod','blas'], define_macros = MACROS + [('NPARTITION', '1')], - sources = [ 'C/cholmod.c' ] + - ['C/SuiteSparse/AMD/Source/' + s for s in ['amd_global.c', - 'amd_postorder.c', 'amd_post_tree.c', 'amd_2.c']] + - ['C/SuiteSparse/COLAMD/Source/' + s for s in ['colamd.c', - 'colamd_global.c']] + - glob('C/SuiteSparse/CHOLMOD/Core/c*.c') + - glob('C/SuiteSparse/CHOLMOD/Cholesky/c*.c') + - ['C/SuiteSparse/CHOLMOD/Check/cholmod_check.c'] + - glob('C/SuiteSparse/CHOLMOD/Supernodal/c*.c') ) + sources = [ 'C/cholmod.c' ]) amd = Extension('amd', - include_dirs = [ 'C/SuiteSparse/AMD/Include', - 'C/SuiteSparse/UFconfig' ], define_macros = MACROS, - sources = [ 'C/amd.c' ] + glob('C/SuiteSparse/AMD/Source/*.c') ) + libraries = [ 'amd' ], + sources = [ 'C/amd.c' ]) -misc_solvers = Extension('misc_solvers', libraries = ['lapack', 'blas'], +misc_solvers = Extension('misc_solvers', libraries = ['lapack'], library_dirs = [ ATLAS_LIB_DIR ], define_macros = MACROS, sources = ['C/misc_solvers.c'] )