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Gentoo's Bugzilla – Attachment 227089 Details for
Bug 314053
ccp4: mv CBIN/CCP4_BIN away from /usr/bin (was: sci-chemistry/ccp4i: incomplete/erroneous rename patches)
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[patch]
Updated 6.1.3-rename-rapper.patch.
6.1.3-rename-rapper.patch (text/plain), 2.17 KB, created by
Johan Hattne
on 2010-04-09 08:55:46 UTC
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Description:
Updated 6.1.3-rename-rapper.patch.
Filename:
MIME Type:
Creator:
Johan Hattne
Created:
2010-04-09 08:55:46 UTC
Size:
2.17 KB
patch
obsolete
>--- ccp4i/scripts/check.script.orig 2010-04-08 20:02:12.490588502 -0500 >+++ ccp4i/scripts/check.script 2010-04-08 20:05:34.452079603 -0500 >@@ -24,7 +24,7 @@ > if $RUN_RAMPAGE { > > # Generate command line >- set cmd "[BinPath rapper]" >+ set cmd "[BinPath rappermc]" > > set rapperdatadir [FileJoin [GetEnvPath CCP4] share rapper] > set paramsfile [FileJoin $rapperdatadir params.xml] >--- ccp4i/scripts/rapper.script.orig 2010-04-08 20:01:57.389778204 -0500 >+++ ccp4i/scripts/rapper.script 2010-04-08 20:06:35.222315765 -0500 >@@ -17,7 +17,7 @@ > > #set up command line > >-set cmd "[BinPath rapper]" >+set cmd "[BinPath rappermc]" > > set rapperdatadir [FileJoin [GetEnvPath CCP4] share rapper] > set paramsfile [FileJoin [GetEnvPath CCP4] share rapper params.xml] >@@ -180,7 +180,7 @@ > > # Run RAPPER to join loop back to framework and out put to defined pdb file > # Also need to sort out multimodel files join - FIX ME >-set cmd2 "[BinPath rapper]" >+set cmd2 "[BinPath rappermc]" > append cmd2 " $paramsfile joinpdb " > append cmd2 " --pdb2 \"$root\-loop.pdb\" " > append cmd2 " --pdb \"$root\-framework.pdb\" " >--- ccp4i/tasks/check.tcl.orig 2010-04-08 20:02:28.843383341 -0500 >+++ ccp4i/tasks/check.tcl 2010-04-08 20:07:02.105978074 -0500 >@@ -46,7 +46,7 @@ > # Check for Rampage program. If it is not found, we switch off the option. > # If it was the only option, script will fail with next check. > if { $array(RUN_RAMPAGE) == 1 } { >- if { [FindExecutable "rapper"] == "" } { >+ if { [FindExecutable "rappermc"] == "" } { > WarningMessage "Input Error: Rapper_Rampage program not found in system path." > set array(RUN_RAMPAGE) 0 > } >--- ccp4i/tasks/rapper.tcl.orig 2010-04-08 20:02:43.368013810 -0500 >+++ ccp4i/tasks/rapper.tcl 2010-04-08 20:04:34.949827502 -0500 >@@ -28,7 +28,7 @@ > # Check for RAPPER program. If it is not found, we switch off the option. > # If it was the only option, script will fail with next check. > if { [regexp MODEL $build_type ] && $prog_type == "RAPPER"} { >- if { [FindExecutable "rapper"] == "" } { >+ if { [FindExecutable "rappermc"] == "" } { > WarningMessage "Input Error: RAPPER program not found in system path." > set build_type 0 > }
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bug 314053
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