-------------------------------------------------------------------------------- * Host Portage ARCH: amd64 * Target Portage ARCH: alpha * Target System: alpha-unknown-linux-gnu * Stage: 4 (C/C++ compiler) * binutils: binutils-[latest] * gcc: gcc-[latest] * headers: linux-headers-[latest] * libc: glibc-[latest] * PORTDIR_OVERLAY: /usr/portage/local/layman/flameeyes-overlay * PORT_LOGDIR: /var/log/portage * PKGDIR: /usr/portage/packages/cross/alpha-unknown-linux-gnu * PORTAGE_TMPDIR: /var/tmp/cross/alpha-unknown-linux-gnu _ - ~ - _ - ~ - _ - ~ - _ - ~ - _ - ~ - _ - ~ - _ - Portage 2.1.5_rc10 (default-linux/amd64/2007.0/desktop, gcc-4.3.0, glibc-2.7-r2, 2.6.26-rc1 x86_64) ================================================================= System uname: 2.6.26-rc1 x86_64 Intel(R) Core(TM)2 Duo CPU T9300 @ 2.50GHz Timestamp of tree: Thu, 15 May 2008 05:33:01 +0000 distcc 2.18.3 x86_64-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled] ccache version 2.4 [enabled] app-shells/bash: 3.2_p39-r1 dev-java/java-config: 1.3.7, 2.1.6 dev-lang/python: 2.4.4-r6, 2.5.2-r2 dev-python/pycrypto: 2.0.1-r6 dev-util/ccache: 2.4-r7 sys-apps/baselayout: 2.0.0 sys-apps/openrc: 9999 sys-apps/sandbox: 1.2.18.1-r2 sys-devel/autoconf: 2.13, 2.62 sys-devel/automake: 1.5, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.1-r1 sys-devel/binutils: 2.18-r1 sys-devel/gcc-config: 1.4.0-r4 sys-devel/libtool: 2.2.4 virtual/os-headers: 2.6.25-r2 ABI="amd64" ACCEPT_KEYWORDS="amd64 ~amd64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi null plug rate route share shm softvol" ANT_HOME="/usr/share/ant-core" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ARCH="amd64" ASFLAGS_x86="--32" AUTOCLEAN="yes" BINSORT_SCR="/tmp/root" BLASTDB="/usr/share/ncbi/formatdb" BLASTMAT="/usr/share/ncbi/data" CBIN="/usr/bin" CBUILD="x86_64-pc-linux-gnu" CCACHE_DIR="/var/tmp/portage/.ccache" CCACHE_SIZE="4G" CCP4="/usr" CCP4I_HELP="/usr/lib64/ccp4/ccp4i/help" CCP4I_TCLTK="/usr/bin" CCP4I_TOP="/usr/lib64/ccp4/ccp4i" CCP4_BIN="/usr/bin" CCP4_BROWSER="mozilla" CCP4_HELPDIR="/usr/help/" CCP4_LIB="/usr/lib" CCP4_MASTER="/usr" CCP4_OPEN="UNKNOWN" CCP4_SCR="/tmp/root" CDEFINE_amd64="__x86_64__" CDEFINE_x86="__i386__" CDOC="/usr/doc" CETC="/usr/etc" CEXAM="/usr/examples" CFLAGS=" -ftracer -O2 -pipe -g -w -DFORTIFY_SOURCE=2 -fstack-protector -march=native -ftree-vectorize -msse4.1 -funsafe-math-optimizations -fivopts -fmodulo-sched -minline-stringops-dynamically -ftree-loop-im -funswitch-loops -fvect-cost-model -ftree-loop-linear -fvariable-expansion-in-unroller" CFLAGS_x86="-m32 -L/emul/linux/x86/lib -L/emul/linux/x86/usr/lib" CHOST="x86_64-pc-linux-gnu" CHOST_amd64="x86_64-pc-linux-gnu" CHOST_x86="i686-pc-linux-gnu" CHTML="/usr/html" CINCL="/usr/usr/share/ccp4/include" CLASSPATH="/usr/bin:." CLEAN_DELAY="2" CLIB="/usr/lib" CLIBD="/usr/usr/share/ccp4/data" CLIBD_MON="/share/ccp4/data/monomers/" CLIBS="/usr/lib/src" CLUSTALW_4_TCOFFEE="/usr/bin/clustalw" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/config /var/lib/hsqldb /var/spool/torque" CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/terminfo /etc/texmf/web2c /etc/udev/rules.d" COOT_REFMAC_LIB_DIR="/usr/share/coot/lib" CPROG="/usr/src" CRANK="/usr/ccp4i/crank" CVS_RSH="ssh" CXXFLAGS=" -ftracer -O2 -pipe -g -w -DFORTIFY_SOURCE=2 -fstack-protector -march=native -ftree-vectorize -msse4.1 -funsafe-math-optimizations -fivopts -fmodulo-sched -minline-stringops-dynamically -ftree-loop-im -funswitch-loops -fvect-cost-model -ftree-loop-linear -fvariable-expansion-in-unroller" DCCC_PATH="/usr/lib/distcc/bin" DEFAULT_ABI="amd64" DISPLAY=":0.0" DISTCC_LOG="" DISTCC_VERBOSE="0" DISTDIR="/usr/portage/distfiles" DYLD_LIBRARY_PATH="/usr/lib" ECHANGELOG_USER="Donnie Berkholz ;" EDITOR="/bin/nano" ELIBC="glibc" EMBOSS_ACDROOT="/usr/share/EMBOSS/acd" EMERGE_WARNING_DELAY="10" FEATURES="ccache cvs distlocks fixpackages parallel-fetch sandbox sfperms sign splitdebug strict unmerge-orphans userfetch userpriv usersandbox" FETCHCOMMAND="/usr/bin/wget -t 5 -T 60 --passive-ftp -O "${DISTDIR}/${FILE}" "${URI}"" FFLAGS=" -ftracer -O2 -pipe -g -w -DFORTIFY_SOURCE=2 -fstack-protector -march=native -ftree-vectorize -msse4.1 -funsafe-math-optimizations -fivopts -fmodulo-sched -minline-stringops-dynamically -ftree-loop-im -funswitch-loops -fvect-cost-model -ftree-loop-linear -fvariable-expansion-in-unroller" FLTK_DOCDIR="/usr/share/doc/fltk-1.1.7-r3/html" GCC_3_CFLAGS="-march=nocona" GCC_4_3_CFLAGS="-march=native -ftree-vectorize -msse4.1 -funsafe-math-optimizations -fivopts -fmodulo-sched -minline-stringops-dynamically -ftree-loop-im -funswitch-loops -fvect-cost-model -ftree-loop-linear -fvariable-expansion-in-unroller" GCC_SPECS="" GDK_USE_XFT="1" GENERATION="2" GENTOO_MIRRORS="http://distfiles.gentoo.org http://distro.ibiblio.org/pub/linux/distributions/gentoo" GUILE_LOAD_PATH="/usr/share/guile/1.8" HELPDIR="/usr/help/" HOME="/root" INFOPATH="/usr/share/info:/usr/share/binutils-data/x86_64-pc-linux-gnu/2.18/info:/usr/share/gcc-data/x86_64-pc-linux-gnu/4.3.0/info:/usr/share/info/emacs-23" INPUT_DEVICES="mouse keyboard" JAVAC="/etc/java-config-2/current-system-vm/bin/javac" JAVACC_HOME="/usr/share/javacc/" JAVA_HOME="/etc/java-config-2/current-system-vm" JDK_HOME="/etc/java-config-2/current-system-vm" KDEDIRS="/usr:/usr/local:/usr/kde/3.5" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LC_ALL="en_US.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LDFLAGS_x86="-m elf_i386 -L/emul/linux/x86/lib -L/emul/linux/x86/usr/lib" LD_LIBRARY_PATH="~/lib:/usr/lib" LESS="-R -M --shift 5" LESSOPEN="|lesspipe.sh %s" LIBDIR_amd64="lib64" LIBDIR_x86="lib32" LINGUAS="en en_US" LOGNAME="root" LS_COLORS="rs=0:di=01;34:ln=01;36:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:su=37;41:sg=30;43:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.pdf=00;32:*.ps=00;32:*.txt=00;32:*.patch=00;32:*.diff=00;32:*.log=00;32:*.tex=00;32:*.doc=00;32:*.aac=00;36:*.au=00;36:*.flac=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:" MAKEOPTS="-j3 -s" MANPATH="/etc/java-config-2/current-system-vm/man:/usr/man:/usr/local/share/man:/usr/share/man:/usr/share/binutils-data/x86_64-pc-linux-gnu/2.18/man:/usr/share/gcc-data/x86_64-pc-linux-gnu/4.3.0/man:/opt/blackdown-jdk-1.4.2.03/man:/etc/java-config/system-vm/man/:/usr/lib64/php5/man/:/usr/kde/3.5/share/man:/usr/qt/3/doc/man" MCTYPE="unix" MMCIFDIC="/usr/lib/cif_mmdic.lib" MOLREPLIB="/share/ccp4/data/monomers/" MOSHELPFILE="mosflm" MULTILIB_ABIS="amd64 x86" MULTILIB_STRICT_DENY="64-bit.*shared object" MULTILIB_STRICT_DIRS="/lib /usr/lib /usr/kde/*/lib /usr/qt/*/lib /usr/X11R6/lib" MULTILIB_STRICT_EXEMPT="(perl5|gcc|gcc-lib|binutils|eclipse-3|debug|portage)" NCBI="/etc/ncbi" NOCOLOR="true" OLDPWD="/root" OPENGL_PROFILE="xorg-x11" PATH="/lib64/rc/bin:/bin:/sbin:/usr/bin:/usr/sbin:/usr/local/bin:/usr/local/sbin:/root/rosetta-scripts/zonesUtil:/root/rosetta-scripts/tex-fragpicker:/root/rosetta-scripts/ssUtil:/root/rosetta-scripts/net-local-bin:/root/rosetta-scripts/msaUtil:/root/rosetta-scripts/bqian-src-pdbUtil:/root/rosetta-scripts/bqian-scripts:/root/rosetta-scripts/mtyka-bin:/root/rosetta-scripts/rhiju-python:/root/rosetta-scripts/bin:/root/multi/util:/root/multi/prep:/root/multi/src:/root/multi:/root/scripts:/root/bin:/root/dev/public_html/scripts:/usr/lib64/ccp4/ccp4i/bin:/usr/etc:/opt/bin:/usr/x86_64-pc-linux-gnu/gcc-bin/4.3.0:/opt/blackdown-jdk-1.4.2.03/bin:/opt/blackdown-jdk-1.4.2.03/jre/bin:/usr/kde/3.5/sbin:/usr/kde/3.5/bin:/usr/qt/3/bin:/opt/foldx-bin/bin" PBS_SERVER_HOME="/var/spool/torque" PKGDIR="/usr/portage/packages/cross/alpha-unknown-linux-gnu" PKG_CONFIG_PATH="/usr/qt/3/lib64/pkgconfig" PLOT_COMMAND="lp -s -dmicrolaser" PLPLOT_LIB="/usr/share/EMBOSS/" PORTAGE_ARCHLIST="ppc s390 amd64 x86 ppc64 x86-fbsd m68k arm sparc sh mips ia64 alpha hppa sparc-fbsd" PORTAGE_BINHOST_CHUNKSIZE="3000" PORTAGE_BIN_PATH="/usr/lib64/portage/bin" PORTAGE_CONFIGROOT="/" PORTAGE_DEBUG="0" PORTAGE_DEPCACHEDIR="/var/cache/edb/dep" PORTAGE_ECLASS_WARNING_ENABLE="0" PORTAGE_ELOG_CLASSES="log warn error" PORTAGE_ELOG_MAILFROM="portage@localhost" PORTAGE_ELOG_MAILSUBJECT="[portage] ebuild log for ${PACKAGE} on ${HOST}" PORTAGE_ELOG_MAILURI="root" PORTAGE_ELOG_SYSTEM="save_summary echo" PORTAGE_FETCH_CHECKSUM_TRY_MIRRORS="5" PORTAGE_FETCH_RESUME_MIN_SIZE="350K" PORTAGE_GID="250" PORTAGE_GPG_DIR="/home/donnie/.gnupg" PORTAGE_GPG_KEY="B4B5AEDB" PORTAGE_INST_GID="0" PORTAGE_INST_UID="0" PORTAGE_PYM_PATH="/usr/lib64/portage/pym" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_RSYNC_RETRIES="3" PORTAGE_TMPDIR="/var/tmp/cross/alpha-unknown-linux-gnu" PORTAGE_WORKDIR_MODE="0700" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/portage/local/layman/flameeyes-overlay /usr/portage/local/layman/vmware /usr/portage/local/layman/sunrise /usr/portage/local/layman/gentopia /usr/portage/local/layman/emacs /usr/portage/local/layman/java-overlay /usr/portage/local/layman/gcc-porting /usr/portage/local/layman/science /usr/portage/local/overlay /usr/portage/local/x11 /usr/portage/local/ltsp" PORT_LOGDIR="/var/log/portage" PRELINK_PATH_MASK="/usr/lib64/klibc" PRINT_COMMAND="lp -s -denscript" PUBLIC_FONT84="/usr/lib/font84.dat" PVM_ARCH="LINUX64" PVM_ROOT="/usr/share/pvm3" PWD="/" PYMOL_DATA="/usr/share/pymol/data" PYMOL_PATH="/usr/lib64/python2.5/site-packages/pymol" PYMOL_SCRIPTS="/usr/share/pymol/scripts" PYTHONDOCS="/usr/share/doc/python-docs-2.5.1/html/lib" PYTHONPATH="/usr/lib64/portage/pym" QMAKESPEC="linux-g++" QTDIR="/usr/qt/3" R3D_LIB="/usr/share/Raster3D/materials" RAGGLE_BROWSER="/usr/bin/lynx" RASMOLPATH="/usr/x-windows/RasMol/src" RCSBROOT="/usr/lib/rcsb" RESUMECOMMAND="/usr/bin/wget -c -t 5 -T 60 --passive-ftp -O "${DISTDIR}/${FILE}" "${URI}"" ROOT="/" ROOTPATH="/opt/bin:/usr/x86_64-pc-linux-gnu/gcc-bin/4.3.0:/opt/blackdown-jdk-1.4.2.03/bin:/opt/blackdown-jdk-1.4.2.03/jre/bin:/usr/kde/3.5/sbin:/usr/kde/3.5/bin:/usr/qt/3/bin:/opt/foldx-bin/bin" RPMDIR="/usr/portage/rpm" RUBYOPT="-rauto_gem" SANE_CONFIG_DIR="/etc/sane.d" SAP_4_TCOFFEE="/usr/bin/sap" SHELL="/bin/bash" SHLVL="2" SSH_ASKPASS="/usr/bin/gtk2-ssh-askpass" STAGE1_USE="nptl nptlonly unicode" STRIDE_BIN="/usr/bin/stride" SYMLINK_LIB="yes" SYNC="rsync://rsync.gentoo.org/gentoo-portage" TERM="xterm-256color" TMP="/tmp/.private/root" TMPDIR="/tmp/.private/root" TRAP_FPE="OVERFL=ABORT; DIVZERO=ABORT; INVALID=ABORT" USB_DEVFS_PATH="/dev/bus/usb" USE="X a52 aac acct acpi adns ads alsa amd64 amrnb amrwb apache2 applet async asyncns audit autoipd automount avahi avalon-logkit bash-completion bcmath berkdb blas bluetooth branding bzip2 cairo caps captury cblas ccache cdda cddb cdio cdparanoia cdr cgi chm cli client-only color-console consolekit cpudetection cpusets cracklib crypt ctype cups curl custom-cflags cvs daap dbus dc1394 deskbar device-mapper dia discard-path disk-partition diskio djvu dri dv dvd dvdr dvdread dynamic eds elf emacs emboss enca encode epiphany esd evo exif fam fastbuild ffmpeg fftw filter firefox flac flatfile fontconfig force-cgi-redirect fortran ftp fuse galago gconf gd gd-external gdbm gedit gif glep glib glitz glsa gmp gnome gnome-keyring gnome-print gnuplot gnutls gpgme gphoto2 gpm graphviz gs gsf gstreamer gtk gtkhtml guile gzip-el hal hash hdaps hyperestraier iconv icu id3tag ieee1394 imagemagick imap imlib inifile inkjar inotify inquisitio iodbc ipod ipw4965 isdnlog jabber java java6 jpeg json justify kde kdrive kdtree keyring kqemu lapack laptop latex libburn libffi libnotify libsamplerate libssh2 libwww live lm_sensors log4j lynxkeymap lzma lzo mad mdnsresponder-compat mhash midi mikmod mktemp mmap mmx mmxext mng modplug mozdevelop mp2 mp3 mpeg mudflap multiuser musepack musicbrainz mysql mysqli nautilus ncurses network network-cron networking networkmanager nfs nodrm nptl nptlonly nsplugin ntp odbc offensive ogg ole openal opengl openmp oss pam pbs pch pcntl pcre pda pdf pdo perl plotutils plugins png pnm policykit portage posix postgres postscript ppds pppd pulseaudio pymacs pymol python qa qemu qt3 qt3support qt4 quicktime radio readline reflection rtc rtsp ruby sasl sdl sdl-image sensord server session sftp sharedext shout sidebar simplexml smi smime smp sms smtp smux sndfile snmp soap sockets sound soup speex spell spl sqlite sqlite3 srt sse sse2 ssl ssse3 startup-notification stream subversion suhosin svg swat syslog sysvipc t1lib taglib tagwriting tcpd theora threads threadsafe tidy tiff tokenizer totem truetype tunepimp twolame umfpack unicode upnp usb v4l v4l2 visibility vlm vnc vorbis wavpack webdav webdav-serf wifi winbind winpopup wmf wxwindows x264 x86emu xanim xcb xcomposite xft xine xinerama xml xmlreader xmlrpc xmlwriter xorg xosd xscreensaver xsl xulrunner xv xvid xvmc yahoo zeroconf zip zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="mouse keyboard" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en en_US" USERLAND="GNU" VIDEO_CARDS="i810 intel" USER="root" USERLAND="GNU" USE_EXPAND="ALSA_CARDS ALSA_PCM_PLUGINS APACHE2_MODULES APACHE2_MPMS CAMERAS CROSSCOMPILE_OPTS DVB_CARDS ELIBC FCDSL_CARDS FOO2ZJS_DEVICES FRITZCAPI_CARDS INPUT_DEVICES KERNEL LCD_DEVICES LINGUAS LIRC_DEVICES MISDN_CARDS USERLAND VIDEO_CARDS" USE_EXPAND_HIDDEN="CROSSCOMPILE_OPTS ELIBC KERNEL USERLAND" USE_ORDER="env:pkg:conf:defaults:pkginternal:env.d" VIDEO_CARDS="i810 intel" VMHANDLE="blackdown-jdk-1.4.2" XAUTHORITY="/root/.xauth5vMzea" XDG_DATA_DIRS="/usr/share:/usr/kde/3.5/share:/usr/local/share" XERCESC_NLS_HOME="/usr/share/xerces-c/msg" XSESSION="Gnome" XUSERFILESEARCHPATH="/usr/lib/X11/app-defaults/%N:/usr/lib/X11/app-defaults" _="/usr/bin/emerge" pd="/usr/portage"