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" just an alias for six_frame_translations " | " just an alias for six_frame_translations " |
return six_frame_translations(seq, genetic_code) | return six_frame_translations(seq, genetic_code) |
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def complement(seq): |
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" returns the complementary sequence (NOT antiparallel) " |
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return ''.join([IUPACData.ambiguous_dna_complement[x] for x in seq]) |
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def six_frame_translations(seq, genetic_code = 1): | def six_frame_translations(seq, genetic_code = 1): |
""" | """ |
nice looking 6 frame translation with GC content - code from xbbtools | nice looking 6 frame translation with GC content - code from xbbtools |
