prints-37.0.ebuild

prints-37.0.ebuild (text/plain), 1.11 KB, created by Olivier Fisette (RETIRED) on 2004-06-18 08:34:45 UTC

# Copyright 1999-2004 Gentoo Technologies, Inc.
# Distributed under the terms of the GNU General Public License v2
# $Header: $

DESCRIPTION="A protein motif fingerprint database"
HOMEPAGE="http://www.bioinf.man.ac.uk/dbbrowser/PRINTS/"
SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/newpr.lis.gz
	ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.all.fasta.Z
	ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.dat.gz
	ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.lis.gz
	ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.nam.gz
	ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.vsn.gz"
LICENSE="public-domain"
SLOT="0"
KEYWORDS="~x86"
IUSE="emboss no-raw"

DEPEND="emboss? ( =app-sci/emboss )"

S=${WORKDIR}

src_compile() {
	if use emboss; then
		mkdir PRINTS
		einfo "Indexing PRINTS for usage with EMBOSS."
		EMBOSS_DATA=. printsextract -auto -infile prints37_0.dat || die \
			"Indexing PRINTS failed."
	fi
}


src_install() {
	if ! use no-raw; then
		insinto /usr/share/${PN}
		doins ${PN}37_0.{all.fasta,dat,lis,nam,vsn} newpr.lis
	fi
	if use emboss; then
		insinto /usr/share/EMBOSS/data/PRINTS
		doins PRINTS/*
	fi
}