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Bug#: 92564
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Status: RESOLVED
Resolution: FIXED
Assigned To: Gentoo Science Related Packages <sci@gentoo.org>
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Reporter: Walter Meinl <wuno@lsvw.de>
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Filename Description Type Creator Created Size Actions
ncbi-tools.patch patch for the ebuild to exchange the NCBI-CFLAGS on x86 patch Walter Meinl 2005-05-14 00:58 0000 738 bytes Details | Diff
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Bug 92564 depends on: Show dependency tree
Bug 92564 blocks:
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Description:   Opened: 2005-05-14 00:56 0000 
Due to changes in 'ncbi/platform/linux-x86.ncbi.mk' from "NCBI_LDFLAGS1 = -O3
-mcpu=pentiumpro NCBI_OPTFLAG = -O3 -mcpu=pentiumpro" to "NCBI_LDFLAGS1 = -O3
-mcpu=pentium4 NCBI_OPTFLAG = -O3 -mcpu=pentium4" the NCBI-Flags will not be
removed leading to following outputs during compile:

i686-pc-linux-gnu-gcc -pipe -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -O3
-mcpu=pentium4 -c -march=athlon-xp -m3dnow -O2 -pipe -fomit-frame-pointer 
-I../include -I/usr/X11R6/include -L/usr/X11R6/lib -DWIN_MOTIF ncbithr.c
`-mcpu=' is deprecated. Use `-mtune=' or '-march=' instead.
`-mcpu=' is deprecated. Use `-mtune=' or '-march=' instead.


Reproducible: Always
Steps to Reproduce:
1. compile the new package on x86
2.
3.



Expected Results:  
removal of the original NCBI-Flags

other platform ncbi.mk files seem not to be changed (however better have a look
on them ;-))

------- Comment #1 From Walter Meinl 2005-05-14 00:58:14 0000 ------- 
Created an attachment (id=58854) [edit]
patch for the ebuild to exchange the NCBI-CFLAGS on x86

This patch fixes the 20050429.ebuild

------- Comment #2 From Olivier Fisette 2005-05-16 14:23:00 0000 ------- 
Fixed. Thanks for the tip.

------- Comment #3 From Olivier Fisette 2005-05-18 12:10:49 0000 ------- 
*** Bug 93060 has been marked as a duplicate of this bug. ***
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