Due to changes in 'ncbi/platform/linux-x86.ncbi.mk' from "NCBI_LDFLAGS1 = -O3 -mcpu=pentiumpro NCBI_OPTFLAG = -O3 -mcpu=pentiumpro" to "NCBI_LDFLAGS1 = -O3 -mcpu=pentium4 NCBI_OPTFLAG = -O3 -mcpu=pentium4" the NCBI-Flags will not be removed leading to following outputs during compile: i686-pc-linux-gnu-gcc -pipe -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -O3 -mcpu=pentium4 -c -march=athlon-xp -m3dnow -O2 -pipe -fomit-frame-pointer -I../include -I/usr/X11R6/include -L/usr/X11R6/lib -DWIN_MOTIF ncbithr.c `-mcpu=' is deprecated. Use `-mtune=' or '-march=' instead. `-mcpu=' is deprecated. Use `-mtune=' or '-march=' instead. Reproducible: Always Steps to Reproduce: 1. compile the new package on x86 2. 3. Expected Results: removal of the original NCBI-Flags other platform ncbi.mk files seem not to be changed (however better have a look on them ;-))
Created attachment 58854 [details, diff] patch for the ebuild to exchange the NCBI-CFLAGS on x86 This patch fixes the 20050429.ebuild
Fixed. Thanks for the tip.
*** Bug 93060 has been marked as a duplicate of this bug. ***