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Bug 583416 - dev-vcs/git-annex-6.20160419 : /.../libHSgnutls-0.1.6-I8HnID691ag54IwiAi14e3-ghc7.10.3.so: undefined reference to `gnutls_certificate_type_set_priority'
Summary: dev-vcs/git-annex-6.20160419 : /.../libHSgnutls-0.1.6-I8HnID691ag54IwiAi14e3-...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo's Haskell Language team
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: gnutls-3.5-breakage
  Show dependency tree
 
Reported: 2016-05-18 15:53 UTC by Toralf Förster
Modified: 2016-05-20 21:17 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
dev-vcs:git-annex-6.20160419:20160518-154427.log (dev-vcs:git-annex-6.20160419:20160518-154427.log,81.42 KB, text/plain)
2016-05-18 15:53 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,586.26 KB, text/plain)
2016-05-18 15:53 UTC, Toralf Förster
Details
environment (environment,114.74 KB, text/plain)
2016-05-18 15:53 UTC, Toralf Förster
Details
gnutls-0.2.ebuild (gnutls-0.2.ebuild,717 bytes, text/plain)
2016-05-20 19:42 UTC, EoD
Details

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Description Toralf Förster gentoo-dev 2016-05-18 15:53:33 UTC
      ^
Linking dist/build/git-annex/git-annex ...
/usr/lib64/gnutls-0.1.6/ghc-7.10.3/libHSgnutls-0.1.6-I8HnID691ag54IwiAi14e3-ghc7.10.3.so: undefined reference to `gnutls_certificate_type_set_priority'
collect2: error: ld returned 1 exit status
 * ERROR: dev-vcs/git-annex-6.20160419::gentoo failed (compile phase):
 *   setup build failed


$ cat emerge-info.txt
  -----------------------------------------------------------------

  This is an unstable amd64 chroot image (named amd64-13.0-unstable_20160509-222349) at a hardened host acting as a tinderbox.

  -----------------------------------------------------------------

  make.conf: USE="mmx sse sse2 pax_kernel xtpax -cdinstall -oci8 -bindist -avcodec cdda cgi compat corefonts -custom-optimization egl emacs fpm -gd gif gpg gudev help imap inifile introspection isag javascript kvm mbox mng -objc ois opengl pkcs11 postproc postscript printsupport pyqt4 qml ssse3 -system-libvpx system-sqlite tcl tools truetype -uml uxa v4l v4l2 wav wxwidgets -xmp xscreensaver -zenmap zip"

  -----------------------------------------------------------------

Portage 2.3.0_rc1 (python 3.4.3-final-0, default/linux/amd64/13.0, gcc-5.3.0, glibc-2.23-r2, 4.5.4-hardened-r2 x86_64)
=================================================================
System uname: Linux-4.5.4-hardened-r2-x86_64-Intel-R-_Core-TM-_i7-3770_CPU_@_3.40GHz-with-gentoo-2.2
KiB Mem:    16157888 total,   3182432 free
KiB Swap:   16777212 total,  16541852 free
Timestamp of repository gentoo: Wed, 18 May 2016 13:04:21 +0000
sh bash 4.3_p42-r2
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
app-shells/bash:          4.3_p42-r2::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.22.2::gentoo
dev-lang/python:          2.7.11-r2::gentoo, 3.4.3-r7::gentoo, 3.5.1-r2::gentoo
dev-util/cmake:           3.5.2::gentoo
dev-util/pkgconfig:       0.29.1::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.20.5::gentoo
sys-apps/sandbox:         2.10-r2::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r2::gentoo
sys-devel/automake:       1.10.3-r2::gentoo, 1.11.6-r2::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.9.3::gentoo, 5.3.0::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r2::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.6::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: 1

local
    location: /usr/local/portage
    masters: gentoo
    priority: 2

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /etc/grs/systems.conf /etc/stunnel/stunnel.conf /usr/share/config /usr/share/easy-rsa /usr/share/gnupg/qualified.txt /usr/share/qpsmtpd/plugins /var/lib/hsqldb /var/lib/redmine/config"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /var/lib/redmine/config/locales /var/lib/redmine/config/settings.yml"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/var/tmp/distfiles"
EMERGE_DEFAULT_OPTS="--verbose-conflicts --color=n --nospinner --tree --quiet-build"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://ftp.uni-erlangen.de/pub/mirrors/gentoo rsync://mirror.netcologne.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gor.bytemark.co.uk/gentoo/ rsync://ftp.snt.utwente.nl/gentoo"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl amd64 berkdb bzip2 cdda cgi cli compat corefonts cracklib crypt cxx dri egl emacs fortran fpm gdbm gif gpg gudev help iconv imap inifile introspection ipv6 isag javascript kvm mbox mmx mmxext mng modules multilib ncurses nls nptl ois opengl openmp pam pax_kernel pcre pkcs11 postproc postscript printsupport pyqt4 qml readline seccomp session sse sse2 ssl ssse3 system-sqlite tcl tcpd tools truetype unicode uxa v4l v4l2 wav wxwidgets xattr xscreensaver xtpax zip zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en en_GB" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="intel i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 1 Toralf Förster gentoo-dev 2016-05-18 15:53:38 UTC
Created attachment 434624 [details]
dev-vcs:git-annex-6.20160419:20160518-154427.log
Comment 2 Toralf Förster gentoo-dev 2016-05-18 15:53:41 UTC
Created attachment 434626 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2016-05-18 15:53:43 UTC
Created attachment 434628 [details]
environment
Comment 4 EoD 2016-05-20 19:42:46 UTC
Created attachment 434796 [details]
gnutls-0.2.ebuild

This issue is with <dev-haskell/gnutls-0.2. Once you update dev-haskell/gnutls to 0.2 or above, the issue is fixed.

Not sure if it's better to rename the bug report or create a separate one.
Comment 5 Sergei Trofimovich (RETIRED) gentoo-dev 2016-05-20 21:17:55 UTC
Yeah. That symbol removal is unfortunate how obscure it is. Updated gnutls as: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c53709d6dfce575275dbc4861519d154f5268a01

Thank you!