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Bug 538552 - sci-libs/umfpack-5.2.0 - In file included from umf_internal.h:121:0, from umf_analyze.c:29: ../Include/umfpack.h:31:22: fatal error: UFconfig.h: No such file or directory
Summary: sci-libs/umfpack-5.2.0 - In file included from umf_internal.h:121:0, from umf...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Library (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
Depends on: 534650
Blocks:
  Show dependency tree
 
Reported: 2015-02-02 16:00 UTC by Toralf Förster
Modified: 2015-03-04 14:56 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


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Description Toralf Förster gentoo-dev 2015-02-02 16:00:20 UTC
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
make -j1 
make  all-recursive
make[1]: Entering directory '/var/tmp/portage/sci-libs/umfpack-5.2.0/work/UMFPACK'
Making all in Source
make[2]: Entering directory '/var/tmp/portage/sci-libs/umfpack-5.2.0/work/UMFPACK/Source'
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I..  -I../Include   -O2 -pipe -DDINT -c umf_analyze.c -o umf_i_analyze.lo
libtool: compile:  x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../Include -O2 -pipe -DDINT -c umf_analyze.c  -fPIC -DPIC -o .libs/umf_i_analyze.o
In file included from umf_internal.h:121:0,
                 from umf_analyze.c:29:
../Include/umfpack.h:31:22: fatal error: UFconfig.h: No such file or directory
 #include "UFconfig.h"
                      ^
compilation terminated.
Makefile:604: recipe for target 'umf_i_analyze.lo' failed
make[2]: *** [umf_i_analyze.lo] Error 1
make[2]: Leaving directory '/var/tmp/portage/sci-libs/umfpack-5.2.0/work/UMFPACK/Source'
Makefile:386: recipe for target 'all-recursive' failed
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory '/var/tmp/portage/sci-libs/umfpack-5.2.0/work/UMFPACK'
Makefile:317: recipe for target 'all' failed
make: *** [all] Error 2
emake failed
 * ERROR: sci-libs/umfpack-5.2.0::gentoo failed (compile phase):
 *   emake failed
 * 
 * Call stack:
 *     ebuild.sh, line  93:  Called src_compile
 *   environment, line 2765:  Called die
 * The specific snippet of code:
 *       emake || die "emake failed"
 * 
 * If you need support, post the output of `emerge --info '=sci-libs/umfpack-5.2.0::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-libs/umfpack-5.2.0::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-libs:umfpack-5.2.0:20150202-155510.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-libs/umfpack-5.2.0/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-libs/umfpack-5.2.0/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-libs/umfpack-5.2.0/work/UMFPACK'
 * S: '/var/tmp/portage/sci-libs/umfpack-5.2.0/work/UMFPACK'

 * GNU info directory index is up-to-date.

 * IMPORTANT: 3 config files in '/etc' need updating.
 * See the CONFIGURATION FILES section of the emerge
 * man page to learn how to update config files.

 * IMPORTANT: 1 news items need reading for repository 'gentoo'.
 * Use eselect news to read news items.



! ! !  This is a build bot chroot located at a hardened amd64 host ! ! !

Portage 2.2.14 (python 2.7.9-final-0, default/linux/amd64/13.0/desktop, gcc-4.8.3, glibc-2.19-r1, 3.18.4-hardened x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.18.4-hardened-x86_64-Intel-R-_Core-TM-_i7-3770_CPU_@_3.40GHz-with-gentoo-2.2
KiB Mem:    16166860 total,   1634456 free
KiB Swap:   16777212 total,  16750036 free
Timestamp of tree: Mon, 02 Feb 2015 15:15:01 +0000
ld GNU ld (Gentoo 2.24 p1.4) 2.24
ccache version 3.1.9 [disabled]
app-shells/bash:          4.2_p53
dev-java/java-config:     2.2.0
dev-lang/perl:            5.18.2-r2
dev-lang/python:          2.7.9-r1, 3.3.5-r1
dev-util/ccache:          3.1.9-r4
dev-util/cmake:           2.8.12.2-r1
dev-util/pkgconfig:       0.28-r1
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.13.8
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.9.6-r4, 1.10.3-r1, 1.11.6-r1, 1.13.4
sys-devel/binutils:       2.24-r3
sys-devel/gcc:            4.8.3
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.4
sys-devel/make:           4.0-r1
sys-kernel/linux-headers: 3.16 (virtual/os-headers)
sys-libs/glibc:           2.19-r1
Repositories: gentoo
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/easy-rsa /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--nospinner --tree --quiet-build --deep --jobs 1"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirror.leaseweb.com/gentoo/ http://ftp.uni-erlangen.de/pub/mirrors/gentoo http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://gd.tuwien.ac.at/opsys/linux/gentoo/"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
SYNC="rsync://rsync.de.gentoo.org/gentoo-portage"
USE="X a52 aac acl acpi aes-ni alsa amd64 apache2 avx avx2 berkdb bluetooth branding bzip2 cairo cdda cdr cli consolekit corefonts cracklib crypt cups cxx dbus dnssec dri drmkms dts dvd dvdr ecc emboss encode exif extraengine fam ffmpeg firefox flac fontconfig fortran fpm gdbm gif glamor gpm gtk gudev gui iconv isag jpeg lcms libav libnotify libvirtd logrotate macvtap mad mbox minizip mmx mng modules mp3 mp4 mpeg multilib mysql ncurses nls nptl ogg opengl openmp pam pango pax_kernel pcre pdf plasma png policykit ppds qemu qt3support qt4 readline sdl session spell spice sse sse2 sse4 sse4_1 sse4_2 ssh-askpass ssl ssse3 startup-notification svg tcpd theora thinkpad threads tiff tk tls truetype udev udisks uml unicode upower usb usbredir uxa v4l v4l2 vaapi video vorbis wxwidgets x264 xa xcb xml xmp xscreensaver xv xvfb xvid xvmc zenmap zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev " KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON


The build log is stored in /var/log/portage/_emerge_20150202-155524.log
The chroot image is amd64
Comment 1 Justin Lecher (RETIRED) gentoo-dev 2015-02-13 06:52:27 UTC
Version 5.6.0 doesn't have this problem. Let's wait for stabilization here.
Comment 2 Richard Li 2015-03-04 14:32:38 UTC
(In reply to Justin Lecher from comment #1)
> Version 5.6.0 doesn't have this problem. Let's wait for stabilization here.

Hit the same problem.

More than a month has passed and 5.6.0 is still not stabilized (which means the current stable version is still broken). Why not just add sci-libs/ufconfig as dependency of umfpack-5.2.0?
Comment 3 Justin Lecher (RETIRED) gentoo-dev 2015-03-04 14:56:24 UTC
+  04 Mar 2015; Justin Lecher <jlec@gentoo.org> umfpack-5.2.0.ebuild:
+  Add missing dep, #538552
+