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Bug 528632 - media-gfx/asymptote-2.32 - base/plain_Label.asy: 670.23: reading array of length 4 with out-of-bounds index 4 - Makefile:41: recipe for target 'helix.pdf' failed
Summary: media-gfx/asymptote-2.32 - base/plain_Label.asy: 670.23: reading array of len...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Andrey Grozin
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2014-11-08 11:25 UTC by Juergen Rose
Modified: 2015-01-12 11:05 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log from an other system with the same issue (build.log,47.24 KB, text/plain)
2014-11-08 15:14 UTC, Juergen Rose
Details

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Description Juergen Rose 2014-11-08 11:25:59 UTC
'emerge asymptote' fails with:
...
 * Making pdf docs       
make -j5 -j1 asymptote.pdf 
../asy -dir ../base -config "" -render=0 -f pdf -noprc log2graph.asy
...
../asy -dir ../base -config "" -render=0 -f pdf -noprc helix.asy
../base/plain_Label.asy: 670.23: reading array of length 4 with out-of-bounds index 4
Makefile:41: recipe for target 'helix.pdf' failed
make: *** [helix.pdf] Error 1



root@cheetahnew:/root(5)# emerge --info '=media-gfx/asymptote-2.32::gentoo'
Portage 2.2.14 (python 2.7.8-final-0, default/linux/amd64/13.0, gcc-4.8.3, glibc-2.20, 3.17.2-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.17.2-gentoo-x86_64-Intel-R-_Core-TM-_i3-2120_CPU_@_3.30GHz-with-gentoo-2.2
KiB Mem:     7865104 total,   1835856 free
KiB Swap:   50331640 total,  50308772 free
Timestamp of tree: Sat, 08 Nov 2014 03:00:01 +0000
ld GNU ld (Gentoo 2.24 p1.4) 2.24
distcc 3.1 x86_64-pc-linux-gnu [disabled]
app-shells/bash:          4.3_p30
dev-java/java-config:     2.2.0
dev-lang/perl:            5.20.1-r2
dev-lang/python:          2.7.8, 3.3.5-r1, 3.4.2
dev-util/cmake:           3.0.2
dev-util/pkgconfig:       0.28-r2
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.13.3
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.10.3, 1.11.6, 1.12.6, 1.14.1
sys-devel/binutils:       2.24-r3
sys-devel/gcc:            4.8.3
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.3-r2
sys-devel/make:           4.1-r1
sys-kernel/linux-headers: 3.17-r1 (virtual/os-headers)
sys-libs/glibc:           2.20
Repositories: gentoo science sunrise x-portage g-cpan g-octave
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA PUEL Intel-SDP dlj-1.1 skype-eula skype-4.0.0.7-copyright googleearth AdobeFlash-11.x cadsoft Oracle-BCLA-JavaSE MakeMKV-EULA NVIDIA-CUDA Nero-AAC-EULA GIMPS"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.5/ext-active/ /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage_cheetahnew"
PORTDIR_OVERLAY="/var/lib/layman/science /var/lib/layman/sunrise /usr/local/portage /var/lib/cpan /var/lib/g-octave"
USE="64bit R X Xaw3d a52 aac acl acpi admin afs alsa amd64 ao apache2 apng applet archive armadillo arpack asf aspell atlas audacious audiofile automap automount bash-completion berkdb blas blast bluetooth bluray boost bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cgi chm cli cmake cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia dirac djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples exif expat extensions extra extras faac faad ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx fuse g3dvl gcj gd gdal gdbm gdu gedit geoip geolocation geos gfortran gif gimp git glade glib glpk gml gmp gnome gnome-keyring gnome-print gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz grass gsl gstreamer gtk gtk3 gudev guile hddtemp hdf hdf5 hdri html http httpd hvm hwdb iconv icq icu id3tag ide imagemagick imap inotify introspection ipod ipv6 ithreads jabber jadetex java java6 jbig jit john jpeg jpeg2k kate kdepim kdrive kerberos keymap kpathsea kvm ladspa lame lapack latex lcms ldap lensfun libffi libkms libnotify libsamplerate live lm_sensors lua lzma lzo mad mail maildir mapnik math matroska media-library mercurial mikmod mmx mmxext mng mod modules mono motif mozilla mp3 mp4 mpeg mpi mplayer mtp multilib multimedia musepack musicbrainz mysql mysqli nautilus ncurses netcdf netpbm network networking nfs nls nntp nptl nsplugin ntfs ntp numpy objc ocaml ocr octave odbc ofa ogdi ogg openexr opengl openmp openvg pam pango pcre pda pdf pdl2 perl plasma plotutils plugins png podcast policykit portaudio posix postgres postscript ppds preview-latex proj projectm pstricks pulseaudio python python-bindings q32 qemu qhull qt3support qt4 quicktime raw readline reiserfs reports rle romio rpc rrdcgi rrdtool sage samba sasl schroedinger science sdk sdl secure-delete semantic-desktop server session shout sip slang slp smart smbclient smp sms sndfile snmp soap sockets sound soup sox speex spell sql sqlite sse sse2 sse4 sse4_1 sse4_2 ssl ssse3 stlport subtitles subversion sudo suexec svg svm swig systemd szip t1lib tcl tcpd tex tex4ht texmacs theora thesaurus threads thunderbird tidy tiff tk tools truetype udev udisks unicode usb utempter v4l vaapi vala valgrind vdpau video virt-network virtualbox visio vorbis vpx vtk wav webdav webdav-serf webkit wmf wxwidgets x264 xa xattr xcb xetex xext xft xine xml xmlreader xmlrpc xpm xv xvid xvmc yaml youtube zlib zvbi" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_core authn_dbm authn_default authn_file authz_core authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info lbmethod_byrequests log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CURL_SSL="nss" DRACUT_MODULES="caps dm lvm mdraid syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="cfontz hd44780 mtxorb ncurses X lcd2usb lcdlinux png usblcd" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de fr ru" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" QEMU_SOFTMMU_TARGETS="arm i386 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC, USE_PYTHON

=================================================================
                        Package Settings
=================================================================

media-gfx/asymptote-2.32 was built with the following:
USE="X boehm-gc doc emacs examples fftw gsl imagemagick latex opengl python svg -offscreen -sigsegv -vim-syntax" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7"



root@cheetahnew:/root(6)# emerge -pqv '=media-gfx/asymptote-2.32::gentoo'
[ebuild   R   ] media-gfx/asymptote-2.32  USE="X boehm-gc doc emacs examples fftw gsl imagemagick latex opengl python svg -offscreen -sigsegv -vim-syntax" PYTHON_SINGLE_TARGET="(-python2_7%*)" PYTHON_TARGETS="python2_7"
Comment 1 Jeroen Roovers (RETIRED) gentoo-dev 2014-11-08 15:11:37 UTC
Please attach the entire build log to this bug report.
Comment 2 Juergen Rose 2014-11-08 15:14:43 UTC
Created attachment 388872 [details]
build.log from an other system with the same issue
Comment 3 Juergen Rose 2014-11-17 08:31:37 UTC
'USE=-doc emerge asymptote' works.
Comment 4 Andrey Grozin gentoo-dev 2014-11-19 10:59:56 UTC
Upstream bug https://sourceforge.net/p/asymptote/bugs/184/
Comment 5 Juergen Rose 2014-12-15 10:45:08 UTC
Any news? I tried once more 'MAKEOPTS=-j1 emerge -v1 asymptote' it fails with:
...
 * Making info
make -j1 asymptote.info 
makeinfo  asymptote.texi -o asymptote.info
asymptote.texi:2265: warning: @verbatim should only appear at a line beginning
asymptote.texi:806: warning: could not find @image file `diagonal.txt' nor alternate text
asymptote.texi:858: warning: could not find @image file `diagonal.txt' nor alternate text
asymptote.texi:872: warning: could not find @image file `bigdiagonal.txt' nor alternate text
...
asymptote.texi:8977: warning: could not find @image file `triangulate.txt' nor alternate text
asymptote.texi:9029: warning: could not find @image file `slopefield1.txt' nor alternate text
make -j1 
mkdir -p asy-faq.html
perl bfnnconv.pl asy-faq.bfnn
no asy-faq.xrefdb (No such file or directory) at bfnnconv.pl line 43.
unknown question `brokenpdftex' at bfnnconv.pl line 221, <> line 107.
unknown control `\pageref:brokenpdftex::\endpageref..  ' at bfnnconv.pl line 249, <> line 107.
unknown question `unitsizes' at bfnnconv.pl line 221, <> line 902.
unknown control `\pageref:unitsizes::\endpageref..  ' at bfnnconv.pl line 249, <> line 902.
perl bfnnconv.pl asy-faq.bfnn
 * Making pdf docs       
make -j1 -j1 asymptote.pdf 
../asy -dir ../base -config "" -render=0 -f pdf -noprc helix.asy
../base/plain_Label.asy: 670.23: reading array of length 4 with out-of-bounds index 4
Makefile:41: recipe for target 'helix.pdf' failed
make: *** [helix.pdf] Error 1


I checked this several times. Every time I get the same error.
Comment 6 Andrey Grozin gentoo-dev 2014-12-15 13:16:38 UTC
(In reply to Juergen Rose from comment #5)
> Any news?
See https://sourceforge.net/p/asymptote/bugs/184/
Comment 7 Andrey Grozin gentoo-dev 2014-12-20 11:45:20 UTC
> See https://sourceforge.net/p/asymptote/bugs/184/
A workaround: downgrade ghostscript
Comment 8 Juergen Rose 2014-12-31 12:12:19 UTC
(In reply to Andrey Grozin from comment #7)
> > See https://sourceforge.net/p/asymptote/bugs/184/
> A workaround: downgrade ghostscript

I masked ">app-text/ghostscript-gpl-9.10-r4". There is still an other problem with ghostscript-gpl-9.15. I am not able to work with xelatex, texlive-2014, pstricks and ghostscript-gpl-9.15. Asking in the PSTRICKS mailing list I got the following answer.
 
>> if I run 'xelatex image_test_3.tex' (image_test_3.tex is the attached
>> tex file) with texlive-2013, I get a pdf file with axes, two lines and
>> some legends, see the attached surfaceEnhancement_3.pdf. If I run it now
>> with texlive-2014, xelatex does not show any errors, but I do not get
>> neither axes nor the lines. Only a small part of the legend
>> (E_T^{VC}(\frac{1}{r},Rep)) is shown, see the attached image_test_3.pdf.

> A problem with the current version of ghostscript (9.15)
> Downgrade to 9.10 or use pstill


After downgrading to app-text/ghostscript-gpl-9.10-r4 I could emerge asymptote-2.32.

Maybe ghostscript-gpl-9.15 should be generally masked until these problems are solved.
Comment 9 Andrey Grozin gentoo-dev 2015-01-11 16:28:21 UTC
  11 Jan 2015; Andrey Grozin <grozin@gentoo.org> asymptote-2.32.ebuild,
  +files/asymptote-2.32-ghostscript-9.15.patch:
  Fixing bug #528632
Comment 10 cmuelle8 2015-01-12 11:05:49 UTC
(In reply to Andrey Grozin from comment #9)
>   11 Jan 2015; Andrey Grozin <grozin@gentoo.org> asymptote-2.32.ebuild,
>   +files/asymptote-2.32-ghostscript-9.15.patch:
>   Fixing bug #528632

thanks