Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 468454 - sci-chemistry/gromacs-4.5.7 version bump
Summary: sci-chemistry/gromacs-4.5.7 version bump
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Christoph Junghans (RETIRED)
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2013-05-03 14:16 UTC by Reinis Danne
Modified: 2013-06-11 15:04 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments

Note You need to log in before you can comment on or make changes to this bug.
Description Reinis Danne 2013-05-03 14:16:32 UTC
The tree version of Gromacs 4.5 series is nearly two years old. Recently there have been two releases for it.

http://repo.or.cz/w/gromacs.git/shortlog/refs/tags/v4.5.7

Reproducible: Always
Comment 1 Christoph Junghans (RETIRED) gentoo-dev 2013-05-03 15:37:19 UTC
gromacs-4.6.1 is in the tree, so I don't really see the need to add 4.5.7.
If you really have to use 4.5 for scientific reason use 4.5.9999 from the sci overlay.
Comment 2 Reinis Danne 2013-05-03 15:57:49 UTC
So you expect stable users to use overlay for bugfixes? Really??

There are loads of fixes in 4.5.x and normally it is not advised to switch major versions in the middle of a project, so people are still using it. No, git versions are not an option if one wants to know precise version of the program at any given moment, not to mention added hassle jugling around masked packages.

I'm asking to reconsider this.
Comment 3 Justin Lecher (RETIRED) gentoo-dev 2013-05-03 16:04:31 UTC
He is right. Such applications should be bumped with every revision.
Comment 4 Christoph Junghans (RETIRED) gentoo-dev 2013-05-03 16:14:30 UTC
I am thinking of marking 4.6.1 stable soon and removing 4.5.x completely. Beside the fact that our 4.5.5 is heavily patched for QA reasons by alexxy and my guess is the patch won't apply anymore.
Comment 5 Christoph Junghans (RETIRED) gentoo-dev 2013-05-03 17:07:51 UTC
(In reply to comment #4)
> I am thinking of marking 4.6.1 stable soon and removing 4.5.x completely.
> Beside the fact that our 4.5.5 is heavily patched for QA reasons by alexxy
> and my guess is the patch won't apply anymore.

You are in luck, patches still apply:
+  03 May 2013; Christoph Junghans <ottxor@gentoo.org>
+  +files/gromacs-4.5.7-cmake-cpp-asm.patch, +gromacs-4.5.7.ebuild:
+  added recent 4.5.x version (bug #468454)

So, somebody owes me a beer! Nevertheless 4.5.* will go when 4.6 is stable, which can still take some months.