Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 464880 - sci-mathematics/rstudio - Version bump (for dev-lang/R-3.0.0)
Summary: sci-mathematics/rstudio - Version bump (for dev-lang/R-3.0.0)
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal enhancement (vote)
Assignee: Julian Ospald
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2013-04-06 18:40 UTC by Ted Tanberry
Modified: 2013-04-18 15:55 UTC (History)
4 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
hand edited from 318 to work for 336 (rstudio-0.97.336-paths.patch,5.41 KB, patch)
2013-04-11 17:59 UTC, Ahmet Inan
Details | Diff

Note You need to log in before you can comment on or make changes to this bug.
Description Ted Tanberry 2013-04-06 18:40:15 UTC
dev-lang/R-3.0.0 has been released recently and for me at least the latest in-tree sci-mathematics/rstudio-0.97.318 fails to build in the final stage of linking to this new R version. The latest rstudio (0.97.336) compiles and works for me. To this end, renaming the ebuild, renaming the current patches to match the new ${P} and removing ${P}-paths.patch allows for building and linking rstudio.

Reproducible: Always




See also http://support.rstudio.org/ which suggests to use the "latest version of RStudio" which is 0.97.336 currently for R 3.0.0 support.
Comment 1 Ahmet Inan 2013-04-11 17:59:08 UTC
Created attachment 345252 [details, diff]
hand edited from 318 to work for 336

rstudio-0.97.318-paths.patch looked too ugly to be simply removed so i hand edited the patch to make it apply to rstudio-0.97.336.
just added the new sessionLibraryPath_ lines and took care of the code move.

Ahmet
Comment 2 Myckel Habets 2013-04-13 13:20:27 UTC
Besides the building problem, rstudio also fails to start after upgrading R, giving the following error:

The R session had a fatal error.

/usr/bin/rsession: symbol lookup error: /usr/bin/rsession: undefined symbol: Rf_PrintWarnings
Comment 3 Victor Orozco 2013-04-18 05:15:48 UTC
I can confirm that the bump renaming the ebuild as proposed by Ted and using the patch uploaded by Ahmet works without any issues.

In addition to that it also works for previous versions of R (<3).

Tested on: ~amd64
Comment 4 Julian Ospald 2013-04-18 15:55:22 UTC
+*rstudio-0.97.336 (18 Apr 2013)
+
+  18 Apr 2013; Julian Ospald <hasufell@gentoo.org> +rstudio-0.97.336.ebuild,
+  +files/rstudio-0.97.336-linker_flags.patch,
+  +files/rstudio-0.97.336-paths.patch, +files/rstudio-0.97.336-prefs.patch:
+  version bump wrt #464880