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Bug#: 45938
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Status: RESOLVED
Resolution: FIXED
Assigned To: Gentoo Science Related Packages <sci@gentoo.org>
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Reporter: Olivier Fisette <ribosome@gentoo.org>
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Filename Description Type Creator Created Size Actions
tree-puzzle-5.1.ebuild Ebuild for tree-puzzle-5.1 text/plain Olivier Fisette 2004-03-27 16:30 0000 662 bytes Details
tree-puzzle-5.1.ebuild tree-puzzle-5.1.ebuild - Revised ebuild, ready for commit text/plain Olivier Fisette 2004-05-11 18:47 0000 807 bytes Details
metadata.xml metadata.xml text/plain Olivier Fisette 2004-05-11 18:55 0000 1.42 KB Details
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Bug 45938 depends on: Show dependency tree
Bug 45938 blocks:
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Description:   Opened: 2004-03-27 16:28 0000 
Here is an ebuild for tree-puzzle-5.1, a program for maximum likelihood
analysis of nucleotides, amino acids, and two-state data. The project's home
page is at : http://www.tree-puzzle.de/. 

Tree-puzzle is widely used in computational biochemistry. Its inclusion in
Portage could benefit biologists and bioinformaticians using Gentoo Linux.

Tree-puzzle is programmed in C, has no special build-time or run-time
dependencies, and should (I think) compile on any platform for which a C
compiler is available. I have seen tree-puzzle used on x86 systems and on a SGI
supercomputer. However, the attached ebuild has only been tested on x86
computers. 

Reproducible: Always
Steps to Reproduce:
1.
2.
3.

------- Comment #1 From Olivier Fisette 2004-03-27 16:30:09 0000 ------- 
Created an attachment (id=28179) [details]
Ebuild for tree-puzzle-5.1

------- Comment #2 From Olivier Fisette 2004-05-11 18:47:16 0000 ------- 
Created an attachment (id=31231) [details]
tree-puzzle-5.1.ebuild - Revised ebuild, ready for commit

Added comments; changed dodoc for doins for installing the pdf manual (so it
does not get gziped); removed empty DEPEND declaration; checked syntax with
repoman full.

------- Comment #3 From Olivier Fisette 2004-05-11 18:55:36 0000 ------- 
Created an attachment (id=31232) [details]
metadata.xml

Assigns package to the sci herd, and provides detailed description.

------- Comment #4 From Patrick Kursawe 2004-05-17 04:54:39 0000 ------- 
Looks good.

------- Comment #5 From Patrick Kursawe 2004-05-27 22:47:40 0000 ------- 
*** Bug 51991 has been marked as a duplicate of this bug. ***
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