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Bug 353573 - Please stabilize sci-biology/augustus-2.4
Summary: Please stabilize sci-biology/augustus-2.4
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: High enhancement (vote)
Assignee: Andrey Kislyuk (RETIRED)
URL:
Whiteboard:
Keywords: STABLEREQ
Depends on:
Blocks:
 
Reported: 2011-02-03 00:31 UTC by Andrey Kislyuk (RETIRED)
Modified: 2011-03-09 22:53 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


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Description Andrey Kislyuk (RETIRED) gentoo-dev 2011-02-03 00:31:12 UTC
Please stabilize sci-biology/augustus-2.4. 
 Note: Because of the complexity of science package testing, a compile test is sufficient from the arch teams
Comment 1 Markos Chandras (RETIRED) gentoo-dev 2011-02-03 08:24:55 UTC
 * QA Notice: Files built without respecting LDFLAGS have been detected
 *  Please include the following list of files in your report:
 * /usr/share/augustus/scripts/aln2wig/compileSpliceCands
 * /usr/share/augustus/scripts/compileSpliceCands/compileSpliceCands
 * /usr/bin/augustus
 * /usr/bin/etraining
 * /usr/bin/consensusFinder
 * /usr/bin/curve2hints
Comment 2 Andrey Kislyuk (RETIRED) gentoo-dev 2011-02-04 18:42:46 UTC
Fixed, bumped in place, please proceed
Comment 3 Agostino Sarubbo gentoo-dev 2011-02-05 10:55:44 UTC
* QA Notice: Files built without respecting LDFLAGS have been detected
 *  Please include the following list of files in your report:
 * /usr/share/augustus/scripts/aln2wig/compileSpliceCands
 * /usr/share/augustus/scripts/compileSpliceCands/compileSpliceCands


amd64box ~ # emerge --info | grep Timestamp
Timestamp of tree: Sat, 05 Feb 2011 10:00:01 +0000
Comment 4 Andrey Kislyuk (RETIRED) gentoo-dev 2011-02-07 08:06:28 UTC
Oops, try again please
Comment 5 Agostino Sarubbo gentoo-dev 2011-02-07 13:11:41 UTC
(In reply to comment #4)
> Oops, try again please
> 

synced now. I see last edit (second sed) but the problem is persistent
Comment 6 blain 'Doc' Anderson 2011-02-08 18:46:20 UTC
AMD64 VM


 * QA Notice: Files built without respecting LDFLAGS have been detected
 *  Please include the following list of files in your report:
 * /usr/share/augustus/scripts/aln2wig/compileSpliceCands
 * /usr/share/augustus/scripts/compileSpliceCands/compileSpliceCands
Comment 7 David Abbott (RETIRED) gentoo-dev 2011-02-11 04:23:05 UTC
Archtested on x86: Everything fine
Comment 8 David Abbott (RETIRED) gentoo-dev 2011-02-11 04:24:37 UTC
(In reply to comment #7)
> Archtested on x86: Everything fine
> 
Sorry I got it also;
 * QA Notice: Files built without respecting LDFLAGS have been detected
 *  Please include the following list of files in your report:
 * /usr/share/augustus/scripts/aln2wig/compileSpliceCands
 * /usr/share/augustus/scripts/compileSpliceCands/compileSpliceCands


Comment 9 Thomas Kahle (RETIRED) gentoo-dev 2011-03-09 16:23:15 UTC
x86 done. Thanks David.  (LDFLAGS are low are seeing bear market these days)
Comment 10 Markos Chandras (RETIRED) gentoo-dev 2011-03-09 22:53:38 UTC
ok amd64 stable. We can ignore LDFLAGS for now