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Bug#: 30656
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Status: RESOLVED
Resolution: FIXED
Assigned To: Gentoo Linux bug wranglers <bug-wranglers@gentoo.org>
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Reporter: Peter Gnodde <peter@gnodde.org>
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Filename Description Type Creator Created Size Actions
ncbi-tools-sdk-doc.tar.bz2 ncbi-tools-sdk-doc.tar.bz2 - SDK documentation application/octet-stream Olivier Fisette 2004-10-01 12:33 0000 257.39 KB Details
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Bug 30656 depends on: Show dependency tree
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Description:   Opened: 2003-10-08 05:41 0000 
The patch below will update the ncbi-tools ebuild to use the CFLAGS defined in
make.conf, instead of the default '-O2'.

--- ncbi-tools-04222003-r1.ebuild       2003-09-10 02:10:25.000000000 +0000
+++ ncbi-tools-04222003-r2.ebuild       2003-10-08 13:57:38.000000000 +0000
@@ -29,6 +29,10 @@
        # graphical tools.  But for right now you get everything if you have
        # X installed

+       cp ncbi/platform/linux.ncbi.mk ncbi/platform/linux.ncbi.mk.old
+       sed -e "s/-O2/${CFLAGS}/" \
+               ncbi/platform/linux.ncbi.mk.old > ncbi/platform/linux.ncbi.mk
+
        ./ncbi/make/makedis.csh 2>&1 | tee out.makedis.txt

 }


Reproducible: Always
Steps to Reproduce:

------- Comment #1 From Robin Johnson 2003-10-08 15:08:17 0000 ------- 
I confirm that it seems to work
A better patch is:
sed -e "s/-O2/${CFLAGS}/" -i ncbi/platform/linux.ncbi.mk 

applied in CVS.

------- Comment #2 From Olivier Fisette 2004-10-01 12:33:50 0000 ------- 
Created an attachment (id=40886) [details]
ncbi-tools-sdk-doc.tar.bz2 - SDK documentation

------- Comment #3 From Olivier Fisette 2004-10-01 12:36:24 0000 ------- 
Please ignore attachment. Wrong bug.
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