Bug 306387 – dev-db/mysql-workbench-5.2.15/16: fails with as-needed

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description Bjoern Thorwirth 2010-02-22 16:22:33 UTC]

The packages are failing because libgrt contains undefined references

Reproducible: Always




Error during set creation: Redefinition of set 'kde' (sections: 'usersets', 'kde sets')
Portage 2.2_rc63-r1 (unavailable, gcc-4.3.4, glibc-2.10.1-r1, 2.6.32-tuxonice-r1 x86_64)
=================================================================
System uname: Linux-2.6.32-tuxonice-r1-x86_64-Intel-R-_Core-TM-2_Quad_CPU_Q9450_@_2.66GHz-with-gentoo-2.0.1
Timestamp of tree: Mon, 22 Feb 2010 09:15:01 +0000
distcc 3.1 x86_64-pc-linux-gnu [disabled]
ccache version 2.4 [enabled]
app-shells/bash:     4.0_p35
dev-java/java-config: 2.1.9-r2
dev-lang/python:     2.5.4-r4, 2.6.4-r99
dev-python/pycrypto: 2.1.0_beta1
dev-util/ccache:     2.4-r7
dev-util/cmake:      2.6.4-r3
sys-apps/baselayout: 2.0.1
sys-apps/openrc:     0.6.0-r1
sys-apps/sandbox:    2.2
sys-devel/autoconf:  2.13, 2.63-r1
sys-devel/automake:  1.4_p6, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2, 1.11
sys-devel/binutils:  2.18-r4
sys-devel/gcc:       3.3.6-r1, 3.4.6-r2, 4.3.4
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6b
virtual/os-headers:  2.6.30-r1
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=nocona -O2 -pipe -fomit-frame-pointer"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/X11/xkb /usr/share/config /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d"
CXXFLAGS="-march=nocona -O2 -pipe -fomit-frame-pointer"
DISTDIR="/usr/portage/distfiles"
FEATURES="assume-digests ccache distlocks fixpackages news parallel-fetch preserve-libs protect-owned sandbox sfperms strict test unmerge-logs unmerge-orphans userfetch userpriv usersandbox"
GENTOO_MIRRORS="http://ftp.uni-erlangen.de/pub/mirrors/gentoo "
LANG="de_DE.UTF-8"
LDFLAGS="-Wl,-O1,--as-needed"
LINGUAS="de en"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage/local-overlay /usr/local/portage/layman/python /usr/local/portage/layman/pythonhead /usr/local/portage/layman/gnome /usr/local/portage/layman/java-overlay /usr/local/portage/layman/pro-audio /usr/local/portage/layman/sunrise /usr/local/portage/layman/wolf31o2 /usr/local/portage/layman/science /usr/local/portage/layman/ladi /usr/local/portage/layman/multilib /usr/local/portage/layman/desktop-effects /usr/local/portage/layman/xemacs /usr/local/portage/layman/enlightenment /usr/local/portage/layman/kde /usr/local/portage/layman/sage-on-gentoo /usr/local/portage/layman/jyujin"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="64bit X a52 aac aalib accessibility acl acpi ada alsa amarok amd64 apache2 audiofile authdaemond avahi bash-completion berkdb bidi bindist blas bluetooth branding bzip2 cairo caps cblas cdda cdr chm clearcase cli config_wizard consolekit cpudetection cracklib crypt css cups curl cxx dbus dga djvu dri dssi dts dv dvb dvd dvdr dvdread dvi eds emacs emboss encode esd etk evo ewl extraicons extramodules fam fame fat fbcon fbcondecor fbsplash ffmpeg fftw flac flash fluidsynth foomaticdb fortran fuse gd gdbm gif glitz gnome gnome-keyring gnutls gphoto2 gpm gs gsm gstreamer gtk hal hdaps iconv icq id3 ieee1394 imagemagick imap inkjar inotify ipv6 irc irda jabber jack jackmidi java jfs jingle joystick jpeg kde kipi kqemu ladspa lame laptop lash latex lcd lcms ldap libcaca libnotify libwww live lm_sensors lv2 lzo mad mail maildir matroska midi mikmod mmx mng modules mono mp3 mp4 mpeg mpi mudflap multilib musepack musicbrainz nautilus ncurses network new-login nls nptl nptlonly nsplugin ntfs nv nvidia obex ogg ole openal openexr opengl openmp oss pam pascal pch pcmcia pcre pdf perl php pmu png povray ppds pppd pulseaudio python qt3 qt3support qt4 quicktime quotas radio rar rdesktop readline reflection reiser4 reiserfs rss ruby samba sasl scanner sdl session shout skins slp smp sms sndfile speex spell spl sql sqlite sse sse2 ssl ssse3 startup-notification stream subversion svg sysfs tcpd test theora threads thunar tiff tk truetype tta unicode usb vcd visualization voice vorbis vst wavpack weather wifi winbind wma wmf wxwindows x264 xcb xfs xine xinerama xiph xml xorg xosd xpm xprint xscreensaver xsl xulrunner xv xvid xvmc zeroconf zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="evdev keyboard mouse synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="de en" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia vesa" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

[Comment 1 Bjoern Thorwirth 2010-02-22 16:23:02 UTC]

Created attachment 220709 [details]
build log for .15

[Comment 2 Bjoern Thorwirth 2010-02-22 16:23:21 UTC]

Created attachment 220711 [details]
build log for .16

[Comment 3 Christian Ruppert (idl0r) 2010-02-22 19:36:38 UTC]

I can confirm this bug, seems to be as-needed related.

[Comment 4 Hans de Graaff 2010-02-22 20:05:32 UTC]

I'm using as-needed myself and it works for me. What USE flags are you using for mysql-workbench?

[Comment 5 Christian Ruppert (idl0r) 2010-02-22 22:32:00 UTC]

(In reply to comment #4)
> I'm using as-needed myself and it works for me. What USE flags are you using
> for mysql-workbench?
> 

readline and nls.
Tried without forced as-needed and it builds as expected.

Portage 2.2_rc63 (default/linux/amd64/10.0/desktop, gcc-4.4.1-asneeded, glibc-2.10.1-r1, 2.6.32-gentoo-r6 x86_64)
=================================================================
System uname: Linux-2.6.32-gentoo-r6-x86_64-AMD_Phenom-tm-_II_X4_965_Processor-with-gentoo-2.0.1
Timestamp of tree: Mon, 22 Feb 2010 19:15:01 +0000
ccache version 2.4 [enabled]
app-shells/bash:     4.0_p35
dev-java/java-config: 2.1.10
dev-lang/python:     2.6.4
dev-python/pycrypto: 2.1.0_beta1
dev-util/ccache:     2.4-r7
dev-util/cmake:      2.8.0-r2
sys-apps/baselayout: 2.0.1
sys-apps/openrc:     0.6.0-r1
sys-apps/sandbox:    2.2
sys-devel/autoconf:  2.13, 2.63-r1
sys-devel/automake:  1.4_p6, 1.5, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2
sys-devel/binutils:  2.19.1-r1
sys-devel/gcc:       4.4.1
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6b
virtual/os-headers:  2.6.27-r2
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA DOOM3 Nero-EULA-US dlj-1.1 cadsoft"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/X11/xkb /usr/share/config"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/udev/rules.d"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--with-bdeps y --columns"
FEATURES="assume-digests ccache collision-protect distlocks fakeroot fixpackages news parallel-fetch preserve-libs protect-owned sandbox sfperms sign strict stricter suidctl unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
GENTOO_MIRRORS="ftp://ftp.uni-erlangen.de/pub/mirrors/gentoo http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ http://212.219.56.153/sites/www.ibiblio.org/gentoo/"
LANG="en_US.UTF-8"
LC_ALL="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,-z,now -Wl,--sort-common"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/home/idle/dev/gentoo/overlay /var/lib/layman/kde /var/lib/layman/Spring /usr/local/portage /home/idle/dev/gentoo/sunrise/sunrise"
SYNC="rsync://10.8.6.1/gentoo-portage"
USE="3dnow 3dnowext 64bit 7zip X a52 aac acl akonadi alsa amarok amd64 ao archive asf aspell ass assistant audio audiofile avahi bash-completion berkdb blksha1 browser bugzilla bzip2 cairo ccache cdaudio cdda cddax cddb cdio cdparanoia cdr cg cleartype cli clock clucene cmake colordiff consolekit corefonts cracklib crypt cscope css ctype cuda cups curl curlwrappers cursors cxx dbus designer devhelp dga dirac divx dnsdb docbook downloadorder dri dts dv dvb dvd dvdnav dvdr ebook emovix enca encode enscript eu_epg exif expat faac faad fame fbcon fbcondecor fbdev ffmpeg fftw firefox flac fontconfig fontforge foomaticdb freeimage ftp fts3 fuse gcrypt gd gdbm gecko geoip ggi gif git glade glib glibc-compat20 glitz gmedia gmp gnome gnutls gpg gpgme gpm graphviz gs gstreamer gtk gtkhtml gtkstyle hal hddtemp hdri helpers hpn hunspell ical icons iconv icq icu id3 id3tag idn imagemagick imap imlib infowidget inherit-graph inotify ipfilter iproute2 ithreads jabber javascript jpeg kde kontact kqemu kross lame lastfm lcms libedit libevent libffi libgcrypt liblockfile libmms libnotify libssh2 libv4l2 libwww linuxkeys linuxthreads-tls live logitech-mouse logrotate lzma lzo mad magic maildir mdnsresponder-compat memoryview midi mikmod mime mmap mmx mmxext mng modules mouse mp2 mp3 mp4 mpeg mplayer mudflap multilib musepack music musicbrainz mysql ncurses net netpbm network-cron nls nonfsv4 npp nptl nptlonly nsplugin nvidia offensive ogg openal openexr opengl openmp openssl optimization osdmenu otr oxygen pae pam pango pcap pcf pcntl pcre pdf perl phonon physfs pixmaps plotutils plugins png pop posix prelude ps psf pth python qmake qt3support qt4 quicktime raptor rar readline realmedia recode redland replytolist rtc rtsp sasl schroedinger sdl sdl-image secure-delete semantic-desktop sesame2 session sha512 shm sidebar simplexml slang smime smp smtp sndfile sockets sound sourceview sox speex spell spl sql sqlite sqlite3 srt sse sse2 sse4a ssh ssl startup-notification stream subversion svg svm sysfs syslog sysvipc tabbed taglib theora threads threadsafe threadsonly tidy tiff toolame tools tordns trayicon tremor truetype tv_check tv_combiner tv_pick_cgi twolame udev unicode urandom usb userlocales utils v4l v4l2 valgrind vcd vcdinfo vcdx vdpau video vim-pager vim-syntax vim-with-x vorbis wav webinterface webkit websockets wma wmf wmp wxwidgets wxwindows x264 x86emu xattr xcb xcomposite xext xft xine xinerama xml xmlpatterns xmlrpc xorg xosd xpdf-headers xpm xrandr xscreensaver xterm-color xulrunner xv xvid xvmc zip zlib zsh-completion zvbi" ALSA_CARDS="usb-audio hda-intel" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi null plug rate route share shm softvol mmap_emul" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="evdev keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia fbdev" 
Unset:  CPPFLAGS, CTARGET, FFLAGS, INSTALL_MASK, LINGUAS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

[Comment 6 Christian Ruppert (idl0r) 2010-02-22 22:34:51 UTC]

Created attachment 220773 [details]
build.log

[Comment 7 Bjoern Thorwirth 2010-02-23 09:43:51 UTC]

I can confirm, that '--as-needed' was the problem. Sorry for reporting the issue, without trying to fix it myself. I read yesterday the gentoo --as-needed guide. I don't know how i came to use this flag without reading the guide.

[Comment 8 Christian Ruppert (idl0r) 2010-02-23 11:06:16 UTC]

(In reply to comment #7)
> I can confirm, that '--as-needed' was the problem. Sorry for reporting the
> issue, without trying to fix it myself. I read yesterday the gentoo --as-needed
> guide. I don't know how i came to use this flag without reading the guide.
> 

Its ok imho to use as-needed and reporting bugs as well.

[Comment 9 Hans de Graaff 2010-02-23 18:15:03 UTC]

(In reply to comment #8)

> Its ok imho to use as-needed and reporting bugs as well.

Agreed. The only weird thing is that I can't reproduce it. In any case I know that I only patched the (for me) bare minimum in the current as-needed patch, so I guess more work needs to be done there.

[Comment 10 Christian Ruppert (idl0r) 2010-02-24 17:37:17 UTC]

Please sync your tree in a few hours and try again, should be fixed now :)