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Bug 300504 - sci-geosciences/grass fails patching
Summary: sci-geosciences/grass fails patching
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: High normal (vote)
Assignee: Steve Arnold
URL:
Whiteboard:
Keywords: InVCS
Depends on:
Blocks:
 
Reported: 2010-01-11 00:04 UTC by Diego Elio Pettenò (RETIRED)
Modified: 2010-06-17 07:28 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
Build log (grass-6.4.0_rc5:20100110-181509.log,1.86 KB, text/plain)
2010-01-11 00:04 UTC, Diego Elio Pettenò (RETIRED)
Details
Build log (grass-6.4.0_rc6:20100616-171437.log,1.69 KB, text/plain)
2010-06-16 18:20 UTC, Diego Elio Pettenò (RETIRED)
Details
fixed grass patch (grass-6.4.0_rc6-html-nonviz.patch,1.73 KB, patch)
2010-06-16 21:13 UTC, Christian Schmitt
Details | Diff

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Description Diego Elio Pettenò (RETIRED) gentoo-dev 2010-01-11 00:04:36 UTC
Portage 2.1.7.16 (default/linux/x86/10.0, gcc-4.4.2-asneeded, glibc-2.11-r1, 2.6.32.2 i686)
=================================================================
System uname: Linux-2.6.32.2-i686-Quad-Core_AMD_Opteron-tm-_Processor_2350-with-gentoo-2.0.1
Timestamp of tree: Sun, 10 Jan 2010 13:00:21 +0000
distcc 3.1 i686-pc-linux-gnu [disabled]
ccache version 2.4 [disabled]
app-shells/bash:     4.0_p35
dev-java/java-config: 1.3.7-r1, 2.1.10
dev-lang/python:     2.6.4, 3.1.1-r1
dev-python/pycrypto: 2.1.0
dev-util/ccache:     2.4-r8
dev-util/cmake:      2.8.0
sys-apps/baselayout: 2.0.1
sys-apps/openrc:     0.6.0
sys-apps/sandbox:    2.2
sys-devel/autoconf:  2.13, 2.65
sys-devel/automake:  1.4_p6-r1, 1.5-r1, 1.6.3-r1, 1.7.9-r2, 1.8.5-r4, 1.9.6-r3, 1.10.3, 1.11.1
sys-devel/binutils:  2.20
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6b
virtual/os-headers:  2.6.30-r1
ACCEPT_KEYWORDS="x86 ~x86"
ACCEPT_LICENSE="*"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /opt/openfire/resources/security/ /opt/openjms/config /usr/lib/fax /usr/lib/tomoyo/conf /usr/share/X11/xkb /usr/share/bufrtables /usr/share/config /usr/share/qpsmtpd/plugins /var/bind /var/lib/hsqldb /var/phxd /var/spool/fax/etc /var/spool/torque /var/vpopmail/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -pipe"
DISTDIR="/var/cache/distfiles"
FEATURES="assume-digests distlocks fixpackages news parallel-fetch protect-owned sandbox sfperms split-log strict test test-fail-continue unmerge-orphans userfetch userpriv usersandbox"
GENTOO_MIRRORS="http://ftp.uni-erlangen.de/pub/mirrors/gentoo"
INSTALL_MASK="  /usr/share/doc  /usr/share/info"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1"
MAKEOPTS="-j14"
PKGDIR="/var/spool/portage/packages"
PORTAGE_COMPRESS=""
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/var/cache/portage/tree-tinderbox"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="acl berkdb bzip2 cli cracklib crypt cups cxx dri fortran gdbm gpm iconv ipv6 java5 java6 modules mudflap ncurses nls nostatic nptl nptlonly openmp pam pcre perl pppd python qt3support readline reflection ruby session spl ssl sysfs tcpd unicode x86 xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias auth_digest" ELIBC="glibc" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" RUBY_TARGETS="ruby18" USERLAND="GNU" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, LC_ALL, LINGUAS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
Comment 1 Diego Elio Pettenò (RETIRED) gentoo-dev 2010-01-11 00:04:55 UTC
Created attachment 216040 [details]
Build log
Comment 3 Steve Arnold archtester gentoo-dev 2010-05-20 06:12:07 UTC
This was fixed a while back...
Comment 4 Diego Elio Pettenò (RETIRED) gentoo-dev 2010-06-16 18:19:51 UTC
And the same now happens with rc6.

Can we avoid this for the next release, pretty please?
Comment 5 Diego Elio Pettenò (RETIRED) gentoo-dev 2010-06-16 18:20:38 UTC
Created attachment 235631 [details]
Build log
Comment 6 Christian Schmitt 2010-06-16 18:40:21 UTC
It should no longer fail. I submitted a fixed patch to scarabeus and he included it, together with other fixes, two days ago.
Comment 7 Diego Elio Pettenò (RETIRED) gentoo-dev 2010-06-16 18:57:02 UTC
flame@yamato grass % sudo env USE=-opengl ebuild grass-6.4.0_rc6.ebuild unpack prepare
Appending /media/repos/flame/gentoo/tree to PORTDIR_OVERLAY...
>>> Existing ${T}/environment for 'grass-6.4.0_rc6' will be sourced. Run
>>> 'clean' to start with a fresh environment.
 * grass-6.4.0RC6.tar.gz RMD160 SHA1 SHA256 size ;-) ...                                                                                                    [ ok ]
 * checking grass-6.4.0RC6.tar.gz ;-) ...                                                                                                                   [ ok ]
 * Your CXXFLAGS contains "-fvisibility-inlines-hidden" which can break packages.
 * 
 * Before you file a bug, please remove these flags and 
 * re-compile the package in question as well as all its dependencies
 * CPV:  sci-geosciences/grass-6.4.0_rc6
 * REPO: gentoo
 * USE:  amd64 cxx elibc_glibc ffmpeg jpeg kernel_linux multilib nls png tiff truetype userland_GNU
>>> Checking grass-6.4.0RC6.tar.gz's mtime...
>>> WORKDIR is up-to-date, keeping...
 * grass-6.4.0RC6.tar.gz RMD160 SHA1 SHA256 size ;-) ...                                                                                                    [ ok ]
 * checking grass-6.4.0RC6.tar.gz ;-) ...                                                                                                                   [ ok ]
 * Your CXXFLAGS contains "-fvisibility-inlines-hidden" which can break packages.
 * 
 * Before you file a bug, please remove these flags and 
 * re-compile the package in question as well as all its dependencies
 * CPV:  sci-geosciences/grass-6.4.0_rc6
 * REPO: gentoo
 * USE:  amd64 cxx elibc_glibc ffmpeg jpeg kernel_linux multilib nls png tiff truetype userland_GNU
>>> Checking grass-6.4.0RC6.tar.gz's mtime...
>>> WORKDIR is up-to-date, keeping...
>>> Preparing source in /var/tmp/portage/sci-geosciences/grass-6.4.0_rc6/work/grass-6.4.0RC6 ...
 * Applying grass-6.4.0_rc6-html-nonviz.patch ...

 * Failed Patch: grass-6.4.0_rc6-html-nonviz.patch !
 *  ( /media/repos/flame/gentoo/tree/sci-geosciences/grass/files/grass-6.4.0_rc6-html-nonviz.patch )
 * 
 * Include in your bugreport the contents of:
 * 
 *   /var/tmp/portage/sci-geosciences/grass-6.4.0_rc6/temp/grass-6.4.0_rc6-html-nonviz.patch.out

 * ERROR: sci-geosciences/grass-6.4.0_rc6 failed:
 *   Failed Patch: grass-6.4.0_rc6-html-nonviz.patch!
 * 
 * Call stack:
 *     ebuild.sh, line   48:  Called src_prepare
 *   environment, line 5843:  Called epatch '/media/repos/flame/gentoo/tree/sci-geosciences/grass/files/grass-6.4.0_rc6-html-nonviz.patch'
 *   environment, line 2553:  Called die
 * The specific snippet of code:
 *               die "Failed Patch: ${patchname}!";
 * 
 * If you need support, post the output of 'emerge --info =sci-geosciences/grass-6.4.0_rc6',
 * the complete build log and the output of 'emerge -pqv =sci-geosciences/grass-6.4.0_rc6'.
 * The complete build log is located at '/var/log/portage/build/sci-geosciences/grass-6.4.0_rc6:20100616-185402.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-geosciences/grass-6.4.0_rc6/temp/environment'.
 * S: '/var/tmp/portage/sci-geosciences/grass-6.4.0_rc6/work/grass-6.4.0RC6'


This is current CVS, so no, it's not fixed.
Comment 8 SpanKY gentoo-dev 2010-06-16 19:38:18 UTC
does it fail if you use 'clean setup unpack prepare' ?
Comment 9 Diego Elio Pettenò (RETIRED) gentoo-dev 2010-06-16 19:46:25 UTC
Mike, care to look at the attached log? That's from an _emerge_ output (and the only reason why it didn't look clean on my pasted output is that I ran unpack first then noted it was EAPI=2).
Comment 10 SpanKY gentoo-dev 2010-06-16 19:49:34 UTC
i read your last comment only, and that ebuild output looks screwed up because you're mixing non-noauto ebuild behavior with incomplete noauto lists of steps.  take a chill pill.
Comment 11 Christian Schmitt 2010-06-16 21:12:26 UTC
Diego, you're right, something is wrong there. The patch looks pretty messed up. Here is a fixed version. Dunno what happened.
Comment 12 Christian Schmitt 2010-06-16 21:13:11 UTC
Created attachment 235647 [details, diff]
fixed grass patch
Comment 13 Tomáš Chvátal (RETIRED) gentoo-dev 2010-06-17 07:28:40 UTC
Meh :/
pastebin failed me, for my local overlay testing i used raw patch, but when i downloaded it for cvs commit i used nonraw download link.

Mea culpa.