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Bug 298779 - Please stabilize sci-biology/ncbi-tools-20090809
Summary: Please stabilize sci-biology/ncbi-tools-20090809
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: High normal (vote)
Assignee: Andrey Kislyuk (RETIRED)
URL:
Whiteboard:
Keywords: STABLEREQ
Depends on:
Blocks:
 
Reported: 2009-12-28 19:59 UTC by Andrey Kislyuk (RETIRED)
Modified: 2010-03-29 09:45 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


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Description Andrey Kislyuk (RETIRED) gentoo-dev 2009-12-28 19:59:31 UTC
Please stabilize sci-biology/ncbi-tools-20090809. 
 Note: Because of the complexity of science package testing, a compile test is sufficient from the arch teams
Comment 1 Christian Faulhammer (RETIRED) gentoo-dev 2009-12-29 21:24:07 UTC
x86 stable
Comment 2 Vítor Brandão (noisebleed) 2010-01-24 01:48:07 UTC
AMD64 Arch Tester Report

Compile/Installs: OK

Emerge -pv (USE) variants:
1) USE="" emerge -pv =sci-biology/ncbi-tools-20090809
2) USE="X doc" emerge -pv =sci-biology/ncbi-tools-20090809

Emerge --info:
Portage 2.1.6.13 (default/linux/amd64/10.0, gcc-4.3.4, glibc-2.10.1-r1,
2.6.29-tuxonice-r4 x86_64)
=================================================================           
System uname:
Linux-2.6.29-tuxonice-r4-x86_64-Intel-R-_Core-TM-2_CPU_T5500_@_1.66GHz-with-gentoo-1.12.13
Timestamp of tree: Sat, 23 Jan 2010 18:15:01 +0000                              
app-shells/bash:     4.0_p35                                                    
dev-lang/python:     2.6.4
sys-apps/baselayout: 1.12.13
sys-apps/sandbox:    1.6-r2
sys-devel/autoconf:  2.13, 2.63-r1
sys-devel/automake:  1.7.9-r1, 1.9.6-r2, 1.10.2
sys-devel/binutils:  2.18-r3
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6b
virtual/os-headers:  2.6.27-r2
ACCEPT_KEYWORDS="amd64"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=core2 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/X11/xkb /usr/share/config
/var/lib/redmine/config"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/
/etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/
/etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild
/etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d
/etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c
/etc/udev/rules.d"
CXXFLAGS="-march=core2 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="collision-protect distlocks fixpackages multilib-strict
parallel-fetch protect-owned sandbox sfperms strict test unmerge-orphans
userfetch"
GENTOO_MIRRORS="http://darkstar.ist.utl.pt/gentoo/
ftp://distro.ibiblio.org/pub/linux/distributions/gentoo/
http://ftp.udc.es/gentoo/ "
LANG="pt_PT.UTF-8"
LDFLAGS="-Wl,-O1"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress
--force --whole-file --delete --stats --timeout=180 --exclude=/distfiles
--exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="acl amd64 berkdb bzip2 cli cracklib crypt cups cxx dri fortran gdbm gpm
iconv ipv6 mmx modules mudflap multilib ncurses nls nptl nptlonly openmp pam
pcre perl pppd python readline reflection session spl sse sse2 ssl sysfs tcl
tcpd test unicode xorg zlib" ALSA_CARDS="hda-intel" ALSA_PCM_PLUGINS="adpcm
alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa
lfloat linear meter mmap_emul mulaw multi null plug rate route share shm
softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon
authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile
authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate
dir disk_cache env expires ext_filter file_cache filter headers include info
log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling
status unique_id userdir usertrack vhost_alias" APACHE2_MPMS="prefork"
ELIBC="glibc" INPUT_DEVICES="keyboard mouse synaptics evdev" KERNEL="linux"
LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses
text" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia nv vesa fbdev"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL,
LINGUAS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS,
PORTDIR_OVERLAY

Comment 3 Pacho Ramos gentoo-dev 2010-03-29 09:45:22 UTC
amd64 stable