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Bug#: 240238
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Status: RESOLVED
Resolution: FIXED
Assigned To: Gentoo Chemistry-Related Packages <sci-chemistry@gentoo.org>
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Reporter: Honza Macháček <Hloupy.Honza@centrum.cz>
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Filename Description Type Creator Created Size Actions
platon-20080725-20080924.ebuild.diff platon-20080725-20080924.ebuild.diff patch Honza Macháček 2008-10-06 09:58 0000 1.60 KB Details | Diff
CB8H9-.pdb CB8H9-.pdb text/plain Honza Macháček 2008-10-06 14:51 0000 2.89 KB Details
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Bug 240238 depends on: Show dependency tree
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Description:   Opened: 2008-10-06 09:55 0000
sci-chemistry/platon-20080725 (on x86) basicaly works, but manifests queer
problems, mainly it ignores command line options (or at least file names to
read stated on the command line). The need to type the input file name in the
Platon window is somewhat annoying (especially as pasting of the name from
clipboard works neither). Removing -lf2c and company from the ebuild has
resolved the problem for me.

------- Comment #1 From Honza Macháček 2008-10-06 09:58:45 0000 -------
Created an attachment (id=167436) [details]
platon-20080725-20080924.ebuild.diff

Diff from platon-20080725.ebuild using the f2c library to my
platon-20080924.ebuild that relies on gfortran solely. I've updated the version
number according to the advance at the Platon site as well.

------- Comment #2 From Markus Dittrich 2008-10-06 12:54:06 0000 -------
Hi Honza,

Thanks much for the note and I'll have a look at this.

Best,
Markus

------- Comment #3 From Markus Dittrich 2008-10-06 13:34:39 0000 -------
Since I am not a platon user, would you perhaps be able to
post a short example session + files that would 
allow me to reproduce and test these issues.

Thank you very much.

Best,
Markus

------- Comment #4 From Honza Macháček 2008-10-06 14:51:41 0000 -------
Created an attachment (id=167458) [details]
CB8H9-.pdb

An example PDB file for platon. Any other should do.

When linked with -lf2c (the 20080725 ebuild in the portage tree), `platon
CB8H9-.pdb` produces a platon window stating ``NO PROPER INPUT FILE FOUND''.
Entering the command "file CB8H9-.pdb" in the platon window nevertheless works.

When linked without f2c (my 20080924 ebuild), platon happily accepts its input
file from the command line.

------- Comment #5 From Markus Dittrich 2008-10-07 17:03:29 0000 -------
Thank you very much for providing the instructions. I have
removed linking against lib2c and platon now seems to work as
expected.

Thanks,
Markus

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