Please stabilize rpy-1.0.2-r1. Test (taken from README) within python session with X: >>> from rpy import * >>> values = [r.dchisq(x, 4) for x in r.seq(0, 10, by=0.1)] >>> r.par(ask=1, ann=0) >>> r.plot(values, type='lines') Thanks
test suite fails on amd64/x86: dev-python/rpy-1.0.2-r1 USE="doc examples" ... Testing: test_lapack_load . ---------------------------------------------------------------------- Ran 1 test in 0.217s OK Testing: test_init . ---------------------------------------------------------------------- Ran 1 test in 0.000s OK Testing: test_sigint *** caught segfault *** address 0x14b8798, cause 'invalid permissions' Portage 2.1.4.4 (default/linux/amd64/2008.0/desktop, gcc-4.1.2, glibc-2.6.1-r0, 2.6.26.3 x86_64) ================================================================= System uname: 2.6.26.3 x86_64 Intel(R) Core(TM)2 Duo CPU T8300 @ 2.40GHz Timestamp of tree: Sat, 30 Aug 2008 14:06:01 +0000 app-shells/bash: 3.2_p33 dev-java/java-config: 1.3.7, 2.1.6 dev-lang/python: 2.5.2-r6 dev-python/pycrypto: 2.0.1-r6 sys-apps/baselayout: 1.12.11.1 sys-apps/sandbox: 1.2.18.1-r2 sys-devel/autoconf: 2.13, 2.61-r2 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.1 sys-devel/binutils: 2.18-r3 sys-devel/gcc-config: 1.4.0-r4 sys-devel/libtool: 1.5.26 virtual/os-headers: 2.6.23-r3 ACCEPT_KEYWORDS="amd64" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /opt/openfire/resources/security/ /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/config /var/bind /var/lib/hsqldb /var/spool/torque" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/splash /etc/terminfo /etc/texmf/web2c /etc/udev/rules.d" CXXFLAGS="-O2 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="collision-protect distlocks metadata-transfer multilib-strict parallel-fetch sandbox sfperms strict test unmerge-orphans userfetch userpriv usersandbox" GENTOO_MIRRORS="http://distfiles.gentoo.org http://distro.ibiblio.org/pub/linux/distributions/gentoo" LDFLAGS="-Wl,-O1" PKGDIR="/mnt/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X acl acpi alsa amd64 apache2 berkdb bluetooth branding bzip2 cairo cdr cli cracklib crypt cups dbus doc dri dvd dvdr dvdread eds emboss encode esd evo examples fam firefox fortran gdbm gif gnome gpm gstreamer gtk hal iconv ipv6 isdnlog jpeg kde kerberos ldap libnotify mad midi mikmod mmx mp3 mpeg mudflap multilib ncurses nls nptl nptlonly nsplugin ogg opengl openmp pam pcre pdf perl png ppds pppd python qt3 qt3support qt4 quicktime readline reflection sdl session source spell spl sse sse2 ssl startup-notification svg sysfs tcpd test tiff truetype unicode usb vorbis xml xorg xv zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" USERLAND="GNU" VIDEO_CARDS="fbdev glint i810 mach64 mga neomagic nv r128 radeon savage sis tdfx trident vesa vga via vmware voodoo" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LANG, LC_ALL, LINGUAS, MAKEOPTS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
(In reply to comment #1) > test suite fails on amd64/x86: I can't reproduce your failures at least on my x86 stable box. Only differences is a Athlon-XP with a stable kernel.
It looks like the only relevant call that test_sigint executes is of the form os.kill(os.getpid(), signal.SIGINT) Does this one work if you execute it by hand? Maybe there are problems with it inside the environment in which you run your tests (chroot,...)? Thanks, Markus
disabling usersandbox and userpriv in FEATURES does the trick.
amd64 stable
ia64/x86 stable, closing
