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Bug#: 207109
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Status: RESOLVED
Resolution: FIXED
Assigned To: Gentoo Science Biology related packages <sci-biology@gentoo.org>
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Reporter: Martin Mokrejš <mmokrejs@ribosome.natur.cuni.cz>
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Bug 207109 depends on: Show dependency tree
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Description:   Opened: 2008-01-23 01:17 0000 
Please stabilize for x86 and amd64.

------- Comment #1 From Markus Meier 2008-02-16 09:49:51 0000 ------- 
How can this be tested? A testcase would be great ;)

------- Comment #2 From Jeffrey Gardner 2008-02-16 22:42:38 0000 ------- 
I'll provide a couple of files that you can test against.

Download http://je-fro.net/GAPDH.fasta and http://je-fro.net/SDHC.fasta
Then run dialign-t with a few of the options like,

dialign-t /usr/lib64/dialign-t/conf GAPDH.fasta.txt GAPDH.fasta.aln
dialign-t -O /usr/lib64/dialign-t/conf SDHC.fasta SDHC.fasta.aln
dialign-t -O -P /usr/lib64/dialign-t/conf SDHC.fasta SDHC.fasta.aln

(might be lib32 or just lib depending on the box)

You can check your results (the .aln files) with less, or something nicer like
clustalx.

------- Comment #3 From Christian Faulhammer 2008-02-17 08:11:14 0000 ------- 
x86 stable

------- Comment #4 From Christian Faulhammer 2008-02-17 08:42:55 0000 ------- 
amd64 stable, closing as we are last one
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