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Bug#: 194423
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Status: RESOLVED
Resolution: FIXED
Assigned To: Gentoo Science Biology related packages <sci-biology@gentoo.org>
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Reporter: Timon Van Overveldt <timonvo@gmail.com>
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Filename Description Type Creator Created Size Actions
foldingathome-6.00_beta1.ebuild foldingathome-6.00_beta1 proposed ebuild text/plain Timon Van Overveldt 2007-10-02 02:34 0000 1.75 KB Details
fah-init proposed /etc/init.d/foldingathome file text/plain Timon Van Overveldt 2007-10-02 02:35 0000 902 bytes Details
folding-conf.d proposed /etc/config/foldingathome file text/plain Timon Van Overveldt 2007-10-02 02:36 0000 837 bytes Details
initfolding proposed /opt/foldingathome/amd64-smp/initfolding file text/plain Timon Van Overveldt 2007-10-02 02:36 0000 155 bytes Details
Create a New Attachment (proposed patch, testcase, etc.) View All

Bug 194423 depends on: Show dependency tree
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Bug 194423 blocks:
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Additional Comments: (this is where you put emerge --info)







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Description:   Opened: 2007-10-01 18:17 0000
There is a new beta client of foldingathome: 6.00 beta1
(http://folding.stanford.edu/download.html).
I'd create a new ebuild myself but I'm afraid I'm not that familiar with
writing ebuilds, I'm sorry.

Reproducible: Always

Steps to Reproduce:

------- Comment #1 From Timon Van Overveldt 2007-10-02 02:34:51 0000 -------
Created an attachment (id=132370) [edit]
foldingathome-6.00_beta1 proposed ebuild

------- Comment #2 From Timon Van Overveldt 2007-10-02 02:35:36 0000 -------
Created an attachment (id=132372) [edit]
proposed /etc/init.d/foldingathome file

------- Comment #3 From Timon Van Overveldt 2007-10-02 02:36:05 0000 -------
Created an attachment (id=132373) [edit]
proposed /etc/config/foldingathome file

------- Comment #4 From Timon Van Overveldt 2007-10-02 02:36:34 0000 -------
Created an attachment (id=132375) [edit]
proposed /opt/foldingathome/amd64-smp/initfolding file

------- Comment #5 From Timon Van Overveldt 2007-10-02 02:39:09 0000 -------
I just uploaded a proposed ebuild (working), including 3 config files to be put
in files/6.00_beta1.

I noticed I made a type in "proposed /etc/config/foldingathome file" it
supposed to be "proposed /etc/conf.d/foldingathome file".


emerge --info

Portage 2.1.3.11 (default-linux/amd64/2007.0, gcc-4.2.0, glibc-2.6.1-r0,
2.6.22.1 x86_64)
=================================================================
System uname: 2.6.22.1 x86_64 AMD Athlon(tm) 64 X2 Dual Core Processor 4200+
Timestamp of tree: Mon, 01 Oct 2007 22:50:01 +0000
ccache version 2.4 [enabled]
app-shells/bash:     3.2_p17-r1
dev-java/java-config: 1.3.7, 2.0.33-r1
dev-lang/python:     2.4.4-r4, 2.5.1-r2
dev-python/pycrypto: 2.0.1-r6
dev-util/ccache:     2.4-r7
sys-apps/baselayout: 2.0.0_rc4-r1
sys-apps/sandbox:    1.2.18.1
sys-devel/autoconf:  2.13, 2.61-r1
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10
sys-devel/binutils:  2.18
sys-devel/gcc-config: 1.4.0-r2
sys-devel/libtool:   1.5.24
virtual/os-headers:  2.6.22-r2
ACCEPT_KEYWORDS="amd64 ~amd64"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=athlon64 -O2 -pipe -fomit-frame-pointer -msse3"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/gconf /etc/gentoo-release
/etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/
/etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/terminfo
/etc/udev/rules.d"
CXXFLAGS="-march=athlon64 -O2 -pipe -fomit-frame-pointer -msse3"
DISTDIR="/usr/portage/distfiles"
FEATURES="ccache confcache distlocks metadata-transfer noinfo parallel-fetch
sandbox sfperms strict unmerge-orphans userfetch"
GENTOO_MIRRORS="ftp://ftp.belnet.be/mirror/rsync.gentoo.org/gentoo/ "
LINGUAS="en nl"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress
--force --whole-file --delete --delete-after --stats --timeout=180
--exclude=/distfiles --exclude=/local --exclude=/packages
--filter=H_**/files/digest-*"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/portage/local/layman/java-gcj-overlay /usr/portage/local
/usr/portage/local/kvm/maintainer /usr/portage/local/foldingathome"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="3dnow 3dnowext X a52 aac aalib acl alsa amd64 apache2 asf async audacious
automount avi bash-completion berkdb bitmap-fonts browserplugin busybox bzip2
cairo cdr cgi cli color-console cpudetection cracklib crypt ctype cups curl
curlwrappers dbus device-mapper divx divx4linux dri dts dvd dvdread encode
examples exif extraengine fat ffmpeg flac fluxbox fortran ftp gd gdbm gif glut
gmedia gpm gtk gtk+ gtk2 hash iconv idle imagemagick imap imlib ipv6 isdnlog
java javascript jfs jpeg json latin1 libnotify mad mhash midi ming mmx mmxext
mozdevelop mozilla mp3 mp4 mpeg mplayer msn mudflap mysql mysqli ncurses
netboot nls nptl nptlonly nsplugin ntfs nvidia ogg opengl openmp oss pam pango
pcre pdf perl png pnm ppds pppd python quicktime rar readline realmedia
reflection reiser4 reiserfs sdl session smp soap sockets spl sqlite srt sse
sse2 ssl ssse3 svg sysfs tables tcltk tcpd theora threads tidy tiff tk trayicon
truetype truetype-fonts type1-fonts unicode usb vhosts vim-syntax vorbis wma
wmf wmp wmv x264 xforms xfs xhtml xine xinerama xml2 xorg xpm xsl xv xvid xvmc
zip zlib" ALSA_CARDS="hda-intel usb-audio" ALSA_PCM_PLUGINS="adpcm alaw asym
copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat
linear meter mulaw multi null plug rate route share shm softvol" ELIBC="glibc"
INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz
cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en nl"
LIRC_DEVICES="logitech mceusb2" USERLAND="GNU" VIDEO_CARDS="vesa nv vga fbdev
nvidia"
Unset:  CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LDFLAGS,
PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

------- Comment #6 From Timon Van Overveldt 2007-10-02 23:35:23 0000 -------
Reopened bug after closing it by accident.

------- Comment #7 From Jose daLuz 2007-10-07 00:23:55 0000 -------
I can confirm this ebuild works for me.

Portage 2.1.3.12 (default-linux/amd64/2007.0/desktop, gcc-4.2.0,
glibc-2.6.1-r0, 2.6.22-gentoo-r8 x86_64)
=================================================================
System uname: 2.6.22-gentoo-r8 x86_64 AMD Athlon(tm) 64 X2 Dual Core Processor
6000+
Timestamp of tree: Sat, 06 Oct 2007 12:50:01 +0000
ccache version 2.4 [enabled]
app-shells/bash:     3.2_p17-r1
dev-java/java-config: 1.3.7, 2.0.33-r1
dev-lang/python:     2.5.1-r2
dev-python/pycrypto: 2.0.1-r6
dev-util/ccache:     2.4-r7
sys-apps/baselayout: 2.0.0_rc4-r1
sys-apps/sandbox:    1.2.18.1
sys-devel/autoconf:  2.13, 2.61-r1
sys-devel/automake:  1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10
sys-devel/binutils:  2.18
sys-devel/gcc-config: 1.4.0-r2
sys-devel/libtool:   1.5.24
virtual/os-headers:  2.6.22-r2
ACCEPT_KEYWORDS="amd64 ~amd64"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=k8 -O2 -pipe -ggdb -msse3"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config
/usr/kde/3.5/shutdown /usr/share/config"
CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf
/etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/terminfo
/etc/udev/rules.d"
CXXFLAGS="-march=k8 -O2 -pipe -ggdb -msse3"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--ask --verbose --nospinner"
FEATURES="ccache distlocks fixpackages parallel-fetch sandbox sfperms
splitdebug strict unmerge-orphans userfetch"
GENTOO_MIRRORS="http://gentoo.osuosl.org/
http://distro.ibiblio.org/pub/linux/distributions/gentoo/"
LANG="en_US.UTF-8"
LC_ALL="en_US.UTF-8"
LINGUAS="en"
MAKEOPTS="-j4"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_EXTRA_OPTS="--timeout=120"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress
--force --whole-file --delete --delete-after --stats --timeout=180
--exclude=/distfiles --exclude=/local --exclude=/packages
--filter=H_**/files/digest-*"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/portage/local/layman/sunrise
/usr/portage/local/layman/gnome-experimental /usr/portage/local/layman/xeffects
/usr/portage/local/layman/vmware /usr/local/overlays/myoverlay"
SYNC="rsync://rsync.us.gentoo.org/gentoo-portage"
USE="X a52 aac acl acpi alsa amd64 amr bash-completion berkdb bitmap-fonts
bluetooth bzip2 cairo cdda cdr cli cracklib crypt css cups dbus dri dts dvd
dvdr dvdread eds emboss encode esd evo fam ffmpeg flac fortran gdbm gif glitz
gnome gpm gstreamer gtk hal iconv ipv6 isdnlog java jpeg kde
kdehiddenvisibility kerberos ldap libnotify mad midi mikmod mmx mono mp3 mpeg
mudflap ncurses nls nptl nptlonly ogg opengl openmp pam pcre pdf perl pic png
pppd python qt3support qt4 quicktime readline reflection ruby samba sdl session
spell spl sqlite sse sse2 ssl svg tcpd theora tiff truetype truetype-fonts
type1-fonts unicode usb userlocales vcd vorbis x264 xml xorg xulrunner xv xvid
zlib" ALSA_CARDS="cmipci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare
dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw
multi null plug rate route share shm softvol" ELIBC="glibc"
INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz
cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en"
USERLAND="GNU" VIDEO_CARDS="nvidia"
Unset:  CTARGET, INSTALL_MASK, LDFLAGS, PORTAGE_COMPRESS,
PORTAGE_COMPRESS_FLAGS

------- Comment #8 From Gordon Pettey 2007-10-16 18:14:42 0000 -------
The proposed ebuild has the wrong SRC_URI in it. The correct one is
http://www.stanford.edu/group/pandegroup/folding/release/FAH6.00beta1-Linux.tgz

------- Comment #9 From John Koutras 2007-12-15 19:08:47 0000 -------
(In reply to comment #8)
> The proposed ebuild has the wrong SRC_URI in it. The correct one is
> http://www.stanford.edu/group/pandegroup/folding/release/FAH6.00beta1-Linux.tgz
> 

Thanks, the ebuild seems to be working fine, fah was successfully installed
over amd64.

------- Comment #10 From Jeffrey Gardner 2008-06-15 04:39:21 0000 -------
Added to CVS, thanks!

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