Bugzilla Bug 187124

Please build and test using a pdb file such as:
http://www.rcsb.org/pdb/download/downloadFile.do?fileFormat=pdb&compression=NO&structureId=1WBG

Thanks!
je_fro

alpha/ia64/x86 stable

====amd64====

1. Compiles.
2. Installs.
3. No collisions.
4. Works with opening the posted pdb file and playing with it.....(thanks for
that)

Portage 2.1.2.11 (default-linux/amd64/2007.0, gcc-4.1.2, glibc-2.5-r4,
2.6.20-gentoo-r7 x86_64)
=================================================================
System uname: 2.6.20-gentoo-r7 x86_64 unknown
Gentoo Base System release 1.12.9
Timestamp of tree: Thu, 09 Aug 2007 19:20:01 +0000
ccache version 2.4 [enabled]
dev-java/java-config: 1.3.7, 2.0.33-r1
dev-lang/python:     2.4.4-r4
dev-python/pycrypto: 2.0.1-r6
dev-util/ccache:     2.4-r7
sys-apps/sandbox:    1.2.17
sys-devel/autoconf:  2.13, 2.61
sys-devel/automake:  1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10
sys-devel/binutils:  2.17
sys-devel/gcc-config: 1.3.16
sys-devel/libtool:   1.5.23b
virtual/os-headers:  2.6.21
ACCEPT_KEYWORDS="amd64"
AUTOCLEAN="yes"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=athlon64 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config
/usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config"
CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/gconf /etc/revdep-rebuild
/etc/terminfo"
CXXFLAGS="-march=athlon64 -O2 -pipe"
DISTDIR="/distfiles"
FEATURES="ccache collision-protect distlocks metadata-transfer multilib-strict
parallel-fetch sandbox sfperms strict test userpriv"
GENTOO_MIRRORS="http://mirrors.acm.cs.rpi.edu/gentoo/
http://distfiles.gentoo.org/"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress
--force --whole-file --delete --delete-after --stats --timeout=180
--exclude=/distfiles --exclude=/local --exclude=/packages
--filter=H_**/files/digest-*"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/overlay"
SYNC="rsync://192.168.1.30/gentoo-portage"
USE="X acl aiglx aim amd64 berkdb bitmap-fonts branding cli cracklib crypt cups
dri fortran gdbm gpm gtk iconv imap ipv6 isdnlog midi mmx mpeg3 mudflap ncurses
nls nptl nptlonly nvidia opengl openmp pam pcre perl pppd python qt3 readline
reflection session sockets spl sqlite3 sse sse2 ssl tcpd test truetype-fonts
type1-fonts unicode vim xcomposite xine xorg zlib" ALSA_CARDS="ali5451 als4000
atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968
fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx
via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop
empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi
null plug rate route share shm softvol" ELIBC="glibc" INPUT_DEVICES="keyboard
mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780
lb216 lcdm001 mtxorb ncurses text" USERLAND="GNU" VIDEO_CARDS="nvidia"
Unset:  CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LDFLAGS,
LINGUAS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

amd64 stable