pena image # find usr/ -name "*.jar" -type f usr/share/tomcat-5.5/bin/bootstrap.jar usr/share/tomcat-5.5/bin/tomcat-juli.jar usr/share/tomcat-5.5/lib/catalina-ant.jar usr/share/tomcat-5.5/lib/tomcat-coyote.jar usr/share/tomcat-5.5/lib/catalina-optional.jar usr/share/tomcat-5.5/lib/tomcat-util.jar usr/share/tomcat-5.5/lib/jasper-compiler.jar usr/share/tomcat-5.5/lib/catalina-storeconfig.jar usr/share/tomcat-5.5/lib/naming-factory.jar usr/share/tomcat-5.5/lib/tomcat-http.jar usr/share/tomcat-5.5/lib/catalina-ant-jmx.jar usr/share/tomcat-5.5/lib/jasper-runtime.jar usr/share/tomcat-5.5/lib/servlets-invoker.jar usr/share/tomcat-5.5/lib/catalina.jar usr/share/tomcat-5.5/lib/naming-resources.jar usr/share/tomcat-5.5/lib/catalina-cluster.jar usr/share/tomcat-5.5/lib/servlets-default.jar usr/share/tomcat-5.5/lib/tomcat-ajp.jar usr/share/tomcat-5.5/lib/tomcat-apr.jar usr/share/tomcat-5.5/lib/servlets-webdav.jar usr/share/tomcat-5.5/lib/tomcat-jkstatus-ant.jar usr/share/tomcat-5.5/common/i18n/tomcat-i18n-en.jar usr/share/tomcat-5.5/common/i18n/tomcat-i18n-es.jar usr/share/tomcat-5.5/common/i18n/tomcat-i18n-fr.jar usr/share/tomcat-5.5/common/i18n/tomcat-i18n-ja.jar usr/share/tomcat-5.5/server/webapps/manager/WEB-INF/lib/commons-fileupload.jar usr/share/tomcat-5.5/server/webapps/manager/WEB-INF/lib/commons-io.jar usr/share/tomcat-5.5/server/webapps/manager/WEB-INF/lib/catalina-manager.jar usr/share/tomcat-5.5/server/webapps/host-manager/WEB-INF/lib/catalina-host-manager.jar pena image # file usr/share/tomcat-5.5/server/webapps/manager/WEB-INF/lib/commons-fileupload.jar Indexing: /var/tmp/portage/www-servers/tomcat-5.5.20-r5/image/usr/share/tomcat-5.5/server/webapps/manager/WEB-INF/lib/commons-fileupload.jar Tried to add a class file that already exists in the database: commons-fileupload-0: org.apache.commons.fileupload.DefaultFileItem.class commons-fileupload-0: org.apache.commons.fileupload.DefaultFileItemFactory.class commons-fileupload-0: org.apache.commons.fileupload.DiskFileUpload.class commons-fileupload-0: org.apache.commons.fileupload.FileItem.class commons-fileupload-0: org.apache.commons.fileupload.FileItemFactory.class commons-fileupload-0: org.apache.commons.fileupload.FileUpload.class commons-fileupload-0: org.apache.commons.fileupload.FileUploadBase$InvalidContentTypeException.class commons-fileupload-0: org.apache.commons.fileupload.FileUploadBase$SizeLimitExceededException.class commons-fileupload-0: org.apache.commons.fileupload.FileUploadBase$UnknownSizeException.class commons-fileupload-0: org.apache.commons.fileupload.FileUploadBase.class commons-fileupload-0: org.apache.commons.fileupload.FileUploadException.class commons-fileupload-0: org.apache.commons.fileupload.MultipartStream$IllegalBoundaryException.class commons-fileupload-0: org.apache.commons.fileupload.MultipartStream$MalformedStreamException.class commons-fileupload-0: org.apache.commons.fileupload.MultipartStream.class commons-fileupload-0: org.apache.commons.fileupload.ParameterParser.class commons-fileupload-0: org.apache.commons.fileupload.RequestContext.class commons-fileupload-0: org.apache.commons.fileupload.disk.DiskFileItem.class commons-fileupload-0: org.apache.commons.fileupload.disk.DiskFileItemFactory.class commons-fileupload-0: org.apache.commons.fileupload.portlet.PortletFileUpload.class commons-fileupload-0: org.apache.commons.fileupload.portlet.PortletRequestContext.class commons-fileupload-0: org.apache.commons.fileupload.servlet.ServletFileUpload.class commons-fileupload-0: org.apache.commons.fileupload.servlet.ServletRequestContext.class !!! ERROR: www-servers/tomcat-5.5.20-r5 failed. Call stack: ebuild.sh, line 1596: Called dyn_preinst ebuild.sh, line 1050: Called post_pkg_preinst bashrc, line 10: Called die !!! /home/betelgeuse/jarindex/jarindexer.py failed !!! If you need support, post the topmost build error, and the call stack if relevant.
I added -H to cp command to preserve the symlinks and changed when they were linked in. Fix committed to tree, so closing this bug since it's resolved now :)