Bug 136206 – Installation of asn2all in ncbi-tools

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description José María Fernández González 2006-06-09 09:08:33 UTC]

asn2all is a very versatile application which translates NCBI sequence databases (GenBank, RefSeq) in ASN.1 format (both binary and text ones) to many others (GenBank, FASTA, TinySet XML, INSDSet XML, binary or text ASN.1 and XML).

This program is included inside ncbi-tools package, but it is not compiled and installed by default.

[Comment 1 José María Fernández González 2006-06-09 09:10:29 UTC]

Created attachment 88776 [details]
Ebuild which allows compilation and installation of asn2all

This ebuild is based on the publicly available one, and it only patches the ncbi-package in order to get asn2all compiled/installed.

[Comment 2 José María Fernández González 2006-06-09 09:13:29 UTC]

Created attachment 88777 [details, diff]
Patch to enable asn2all compilation

This patch is used by the previously submitted ebuild, and it enables asn2all compilation

[Comment 3 Jakub Moc (RETIRED) 2006-06-09 09:20:54 UTC]

Please, dont' restrict bugs without any reason.

[Comment 4 Olivier Fisette (RETIRED) 2006-06-26 10:27:20 UTC]

Thanks for the suggestion, Jos

[Comment 5 Olivier Fisette (RETIRED) 2006-06-26 10:27:20 UTC]

Thanks for the suggestion, José. I just updated the NCBI tools in Portage to version 20060507, and added your patch.