First Last Prev Next    No search results available      Search page      Enter new bug
Bug#: 136206
Alias:
Product:
Component:
Status: RESOLVED
Resolution: FIXED
Assigned To: Olivier Fisette <ribosome@gentoo.org>
Hardware:
OS:
Version:
Priority:
Severity:
Reporter: José María Fernández González <jmfernandez@cnio.es>
Add CC:
CC:
Remove selected CCs
URL:
Summary:
Status Whiteboard:
Keywords:

Filename Description Type Creator Created Size Actions
ncbi-tools-20050605-r3.ebuild Ebuild which allows compilation and installation of asn2all text/plain José María Fernández González 2006-06-09 09:10 0000 6.96 KB Details
asn2all.patch Patch to enable asn2all compilation patch José María Fernández González 2006-06-09 09:13 0000 1.16 KB Details | Diff
Create a New Attachment (proposed patch, testcase, etc.) View All

Bug 136206 depends on: Show dependency tree
Show dependency graph
Bug 136206 blocks:
Votes: 0    Show votes for this bug    Vote for this bug

Additional Comments: (this is where you put emerge --info)







View Bug Activity   |   Format For Printing   |   XML   |   Clone This Bug


Description:   Opened: 2006-06-09 09:08 0000
asn2all is a very versatile application which translates NCBI sequence
databases (GenBank, RefSeq) in ASN.1 format (both binary and text ones) to many
others (GenBank, FASTA, TinySet XML, INSDSet XML, binary or text ASN.1 and
XML).

This program is included inside ncbi-tools package, but it is not compiled and
installed by default.

------- Comment #1 From José María Fernández González 2006-06-09 09:10:29 0000 -------
Created an attachment (id=88776) [edit]
Ebuild which allows compilation and installation of asn2all

This ebuild is based on the publicly available one, and it only patches the
ncbi-package in order to get asn2all compiled/installed.

------- Comment #2 From José María Fernández González 2006-06-09 09:13:29 0000 -------
Created an attachment (id=88777) [edit]
Patch to enable asn2all compilation

This patch is used by the previously submitted ebuild, and it enables asn2all
compilation

------- Comment #3 From Jakub Moc 2006-06-09 09:20:54 0000 -------
Please, dont' restrict bugs without any reason.

------- Comment #4 From Olivier Fisette 2006-06-26 10:27:20 0000 -------
Thanks for the suggestion, Jos

------- Comment #5 From Olivier Fisette 2006-06-26 10:27:20 0000 -------
Thanks for the suggestion, José. I just updated the NCBI tools in Portage to
version 20060507, and added your patch.

First Last Prev Next    No search results available      Search page      Enter new bug