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Hi, Attached are an ebuild for namd as well as several patches and the namd license file. namd is a highly parallelizable molecular dynamics package written in C++ and based on the charm++ parallelization framework.
Created an attachment (id=69820) [edit] ebuild for namd2.6b1
Created an attachment (id=69821) [edit] patch to make namd compile with gcc 3.4.x
Created an attachment (id=69822) [edit] patch to adjust paths for proper linking to fftw libs
Created an attachment (id=69823) [edit] patch to provide paths for charm++ provided includes/libraries/binaries
Created an attachment (id=69824) [edit] patch to adjust paths for proper linking to tcl libs
Created an attachment (id=69825) [edit] plain text namd license file
In CVS with a few modifications you might want to check (including a missing dependency on csh/tcsh).