Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 579456 - dev-java/groovy-2.4.5: various exceptions
Summary: dev-java/groovy-2.4.5: various exceptions
Status: RESOLVED OBSOLETE
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Java (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Java team
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2016-04-09 20:04 UTC by aditsu
Modified: 2019-09-14 15:38 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments

Note You need to log in before you can comment on or make changes to this bug.
Description aditsu 2016-04-09 20:04:14 UTC
I installed groovy-2.4.5 and attempted to run some code, but was greeted with a bunch of weird exceptions. Two examples:

1) hello.groovy:
print "Hello"

% groovy hello.groovy
java.io.IOException: Stream closed
        at java.io.BufferedInputStream.getInIfOpen(BufferedInputStream.java:159)
        at java.io.BufferedInputStream.fill(BufferedInputStream.java:246)
        at java.io.BufferedInputStream.read(BufferedInputStream.java:265)
        at java.io.DataInputStream.readUnsignedShort(DataInputStream.java:337)
        at java.io.DataInputStream.readUTF(DataInputStream.java:589)
        at java.io.DataInputStream.readUTF(DataInputStream.java:564)
        at org.codehaus.groovy.reflection.GeneratedMetaMethod$DgmMethodRecord.loadDgmInfo(GeneratedMetaMethod.java:177)
        at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.registerMethods(MetaClassRegistryImpl.java:185)
        at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.<init>(MetaClassRegistryImpl.java:95)
        at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.<init>(MetaClassRegistryImpl.java:73)
        at groovy.lang.GroovySystem.<clinit>(GroovySystem.java:36)
        at org.codehaus.groovy.runtime.InvokerHelper.<clinit>(InvokerHelper.java:65)
        at groovy.lang.GroovyObjectSupport.<init>(GroovyObjectSupport.java:34)
        at groovy.lang.Binding.<init>(Binding.java:35)
        at groovy.lang.GroovyShell.<init>(GroovyShell.java:74)
        at groovy.ui.GroovyMain.processOnce(GroovyMain.java:650)
        at groovy.ui.GroovyMain.run(GroovyMain.java:384)
        at groovy.ui.GroovyMain.process(GroovyMain.java:370)
        at groovy.ui.GroovyMain.processArgs(GroovyMain.java:129)
        at groovy.ui.GroovyMain.main(GroovyMain.java:109)
Hello


2) test.groovy:
1.upto(10) {println it}

% groovy test.groovy 
java.io.IOException: Stream closed
        at java.io.BufferedInputStream.getInIfOpen(BufferedInputStream.java:159)
        at java.io.BufferedInputStream.fill(BufferedInputStream.java:246)
        at java.io.BufferedInputStream.read(BufferedInputStream.java:265)
        at java.io.DataInputStream.readUnsignedShort(DataInputStream.java:337)
        at java.io.DataInputStream.readUTF(DataInputStream.java:589)
        at java.io.DataInputStream.readUTF(DataInputStream.java:564)
        at org.codehaus.groovy.reflection.GeneratedMetaMethod$DgmMethodRecord.loadDgmInfo(GeneratedMetaMethod.java:177)
        at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.registerMethods(MetaClassRegistryImpl.java:185)
        at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.<init>(MetaClassRegistryImpl.java:95)
        at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.<init>(MetaClassRegistryImpl.java:73)
        at groovy.lang.GroovySystem.<clinit>(GroovySystem.java:36)
        at org.codehaus.groovy.runtime.InvokerHelper.<clinit>(InvokerHelper.java:65)
        at groovy.lang.GroovyObjectSupport.<init>(GroovyObjectSupport.java:34)
        at groovy.lang.Binding.<init>(Binding.java:35)
        at groovy.lang.GroovyShell.<init>(GroovyShell.java:74)
        at groovy.ui.GroovyMain.processOnce(GroovyMain.java:650)
        at groovy.ui.GroovyMain.run(GroovyMain.java:384)
        at groovy.ui.GroovyMain.process(GroovyMain.java:370)
        at groovy.ui.GroovyMain.processArgs(GroovyMain.java:129)
        at groovy.ui.GroovyMain.main(GroovyMain.java:109)
Caught: groovy.lang.MissingMethodException: No signature of method: java.lang.Integer.upto() is applicable for argument types: (java.lang.Integer, test$_run_closure1) values: [10, test$_run_closure1@365c30cc]
Possible solutions: wait(), max(int, int), min(int, int), sum(int, int)
groovy.lang.MissingMethodException: No signature of method: java.lang.Integer.upto() is applicable for argument types: (java.lang.Integer, test$_run_closure1) values: [10, test$_run_closure1@365c30cc]
Possible solutions: wait(), max(int, int), min(int, int), sum(int, int)
        at test.run(test.groovy:1)
Comment 1 aditsu 2016-04-09 20:06:06 UTC
I downloaded the groovy 2.4.6 binary from the groovy website, and the same tests are working fine.


# emerge --info
Portage 2.2.26 (python 3.4.3-final-0, default/linux/amd64/13.0/desktop/kde, gcc-4.9.3, glibc-2.21-r2, 4.4.6-gentoo x86_64)
=================================================================
System uname: Linux-4.4.6-gentoo-x86_64-Intel-R-_Core-TM-_i5-6500_CPU_@_3.20GHz-with-gentoo-2.2
KiB Mem:    32807756 total,   4946684 free
KiB Swap:   33554428 total,  33554428 free
Timestamp of repository gentoo: Tue, 05 Apr 2016 15:30:01 +0000
sh bash 4.3_p42-r1
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
distcc 3.2rc1 x86_64-pc-linux-gnu [disabled]
app-shells/bash:          4.3_p42-r1::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.20.2::gentoo
dev-lang/python:          2.7.10-r1::gentoo, 3.4.3-r1::gentoo
dev-util/cmake:           3.3.1-r1::gentoo
dev-util/pkgconfig:       0.28-r2::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.19.1::gentoo
sys-apps/sandbox:         2.10-r1::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69::gentoo
sys-devel/automake:       1.11.6-r1::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.9.3::gentoo
sys-devel/gcc-config:     1.7.3::gentoo
sys-devel/libtool:        2.4.6::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers)
sys-libs/glibc:           2.21-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000

aditsu
    location: /usr/local/portage
    masters: gentoo

proaudio
    location: /var/lib/layman/proaudio
    masters: gentoo
    priority: 0

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA google-chrome Oracle-BCLA-JavaSE"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/easy-rsa /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://gentoo.aditsu.net http://ftp.jaist.ac.jp/pub/Linux/Gentoo/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi alsa amd64 berkdb branding bzip2 cairo cdda cdr cjk cli consolekit cracklib crypt cups cxx dbus declarative dri dts dvd dvdr emboss encode exif fam fat ffmpeg firefox flac fortran gdbm gif gimp glamor gpm gtk iconv icu ipv6 jack jpeg kde kipi lcms libnotify mad mdadm mmx mmxext mng modules mp3 mp4 mpeg multilib ncurses nls nptl ntfs ogg opengl openmp pam pango pch pcre pdf phonon plasma png policykit ppds qt3support qt4 readline samba sdl seccomp session source spell sse sse2 ssl startup-notification svg symlink tcpd threads tiff truetype udev udisks unicode upower usb vorbis vpx wxwidgets x264 xattr xcb xcomposite xinerama xml xscreensaver xv xvid zlib zsh-completion" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 fma3 mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby21" USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 2 James Baldassari 2016-08-25 13:39:35 UTC
Just wanted to mention that I'm having the same problem.  Any 'groovy -e' commands print that IOException stack trace and then print the normal program output below it.

$ groovy -e 'System.out.println("Hello, World!")'
java.io.IOException: Stream closed
	at java.io.BufferedInputStream.getInIfOpen(BufferedInputStream.java:159)
	at java.io.BufferedInputStream.fill(BufferedInputStream.java:246)
	at java.io.BufferedInputStream.read(BufferedInputStream.java:265)
	at java.io.DataInputStream.readUnsignedShort(DataInputStream.java:337)
	at java.io.DataInputStream.readUTF(DataInputStream.java:589)
	at java.io.DataInputStream.readUTF(DataInputStream.java:564)
	at org.codehaus.groovy.reflection.GeneratedMetaMethod$DgmMethodRecord.loadDgmInfo(GeneratedMetaMethod.java:177)
	at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.registerMethods(MetaClassRegistryImpl.java:185)
	at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.<init>(MetaClassRegistryImpl.java:95)
	at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.<init>(MetaClassRegistryImpl.java:73)
	at groovy.lang.GroovySystem.<clinit>(GroovySystem.java:36)
	at org.codehaus.groovy.runtime.InvokerHelper.<clinit>(InvokerHelper.java:65)
	at groovy.lang.GroovyObjectSupport.<init>(GroovyObjectSupport.java:34)
	at groovy.lang.Binding.<init>(Binding.java:35)
	at groovy.lang.GroovyShell.<init>(GroovyShell.java:74)
	at groovy.ui.GroovyMain.processOnce(GroovyMain.java:650)
	at groovy.ui.GroovyMain.run(GroovyMain.java:384)
	at groovy.ui.GroovyMain.process(GroovyMain.java:370)
	at groovy.ui.GroovyMain.processArgs(GroovyMain.java:129)
	at groovy.ui.GroovyMain.main(GroovyMain.java:109)
Hello, World!

Same for groovy -version, although the other strange thing is that it doesn't seem to print out the actual groovy version.  I wonder if it's trying to load some file containing certain meta-data and failing to do so:

$ groovy -version
java.io.IOException: Stream closed
	at java.io.BufferedInputStream.getInIfOpen(BufferedInputStream.java:159)
	at java.io.BufferedInputStream.fill(BufferedInputStream.java:246)
	at java.io.BufferedInputStream.read(BufferedInputStream.java:265)
	at java.io.DataInputStream.readUnsignedShort(DataInputStream.java:337)
	at java.io.DataInputStream.readUTF(DataInputStream.java:589)
	at java.io.DataInputStream.readUTF(DataInputStream.java:564)
	at org.codehaus.groovy.reflection.GeneratedMetaMethod$DgmMethodRecord.loadDgmInfo(GeneratedMetaMethod.java:177)
	at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.registerMethods(MetaClassRegistryImpl.java:185)
	at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.<init>(MetaClassRegistryImpl.java:95)
	at org.codehaus.groovy.runtime.metaclass.MetaClassRegistryImpl.<init>(MetaClassRegistryImpl.java:73)
	at groovy.lang.GroovySystem.<clinit>(GroovySystem.java:36)
	at groovy.ui.GroovyMain.processArgs(GroovyMain.java:123)
	at groovy.ui.GroovyMain.main(GroovyMain.java:109)
Groovy Version:  JVM: 1.8.0_102 Vendor: Oracle Corporation OS: Linux
Comment 3 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2019-09-14 15:38:10 UTC
Package removed.